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    PHACTR2 phosphatase and actin regulator 2 [ Ailuropoda melanoleuca (giant panda) ]

    Gene ID: 100475773, updated on 8-Mar-2024

    Summary

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    Gene symbol
    PHACTR2
    Gene description
    phosphatase and actin regulator 2
    Locus tag
    PANDA_000405
    See related
    Ensembl:ENSAMEG00000011530
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ailuropoda melanoleuca
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
    Orthologs
    human mouse all
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    Genomic context

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    See PHACTR2 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    103 current ASM200744v2 (GCF_002007445.1) 10 NC_048227.1 (88455254..88707711)
    102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003217295.1 (626222..859582, complement)

    Chromosome 10 - NC_048227.1Genomic Context describing neighboring genes Neighboring gene peroxisomal biogenesis factor 3 Neighboring gene alpha-L-fucosidase 2 Neighboring gene NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5-like Neighboring gene uncharacterized LOC117804008 Neighboring gene zinc finger C2HC-type containing 1B Neighboring gene LTV1 ribosome biogenesis factor

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables actin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in actin cytoskeleton organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    phosphatase and actin regulator 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM200744v2 Primary Assembly

    Genomic

    1. NC_048227.1 Reference ASM200744v2 Primary Assembly

      Range
      88455254..88707711
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_019796139.2 → XP_019651698.2  phosphatase and actin regulator 2 isoform X2

      UniProtKB/TrEMBL
      G1LYJ8
      Related
      ENSAMEP00000012154.2, ENSAMET00000012672.2

    2. XM_034669222.1 → XP_034525113.1  phosphatase and actin regulator 2 isoform X1

      UniProtKB/TrEMBL
      G1LYJ8

    3. XM_034669225.1 → XP_034525116.1  phosphatase and actin regulator 2 isoform X6

      UniProtKB/TrEMBL
      A0A7N5K011

    4. XM_019796145.2 → XP_019651704.2  phosphatase and actin regulator 2 isoform X5

      UniProtKB/TrEMBL
      A0A7N5K011
      Related
      ENSAMEP00000032922.1, ENSAMET00000029304.1

    5. XM_034669224.1 → XP_034525115.1  phosphatase and actin regulator 2 isoform X4

      UniProtKB/TrEMBL
      A0A7N5K011

    6. XM_034669223.1 → XP_034525114.1  phosphatase and actin regulator 2 isoform X3

      UniProtKB/TrEMBL
      G1LYJ8, G1LYK6
      Related
      ENSAMEP00000012162.2, ENSAMET00000012680.2
    Nucleotide Protein
    Heading Accession and Version

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