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    LOC138335346 myosin regulatory light chain, striated adductor muscle [ Argopecten irradians (bay scallop) ]

    Gene ID: 138335346, updated on 3-Dec-2024

    Summary

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    Gene symbol
    LOC138335346
    Gene description
    myosin regulatory light chain, striated adductor muscle
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Argopecten irradians
    Lineage
    Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Pteriomorphia; Pectinida; Pectinoidea; Pectinidae; Argopecten
    Also known as
    R-LC
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    Genomic context

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    See LOC138335346 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2024_10 current Ai_NY (GCF_041381155.1) 11 NC_091144.1 (32714133..32725673)

    Chromosome 11 - NC_091144.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC138335343 Neighboring gene chitin synthase chs-2-like Neighboring gene phospholipase DDHD2-like Neighboring gene transmembrane anterior posterior transformation protein 1 homolog

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_091144.1 Chromosome 11 Reference Ai_NY

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Cloning and characterization of the scallop essential and regulatory myosin light chain cDNAs. Goodwin EB, et al. J Biol Chem, 1987 Aug 15. PMID 2440882
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables myosin heavy chain binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of myosin II complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    myosin regulatory light chain A, smooth adductor muscle; myosin regulatory light chain, striated adductor muscle

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_041381155.1-RS_2024_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Ai_NY

    Genomic

    1. NC_091144.1 Reference Ai_NY

      Range
      32714133..32725673
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_069284389.1 → XP_069140490.1  myosin regulatory light chain, striated adductor muscle isoform X2

      UniProtKB/Swiss-Prot
      P13543

    2. XM_069284388.1 → XP_069140489.1  myosin regulatory light chain A, smooth adductor muscle isoform X1

    3. XM_069284390.1 → XP_069140491.1  myosin regulatory light chain, striated adductor muscle isoform X2

      UniProtKB/Swiss-Prot
      P13543
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P13543.3 GenPept UniProtKB/Swiss-Prot:P13543

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