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    Pmar_PMAR019089 GTP-binding nuclear protein ran/tc4, putative [ Perkinsus marinus ATCC 50983 ]

    Gene ID: 9060823, updated on 28-Dec-2023

    Summary

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    Gene symbol
    Pmar_PMAR019089
    Gene description
    GTP-binding nuclear protein ran/tc4, putative
    Locus tag
    Pmar_PMAR019089
    See related
    VectorBase:PMAR019089
    Gene type
    protein coding
    RNA name
    GTP-binding nuclear protein ran/tc4, putative
    RefSeq status
    PROVISIONAL
    Organism
    Perkinsus marinus ATCC 50983 (strain: ATCC 50983, culture-collection: ATCC:50983)
    Lineage
    Eukaryota; Alveolata; Perkinsea; Perkinsida; Perkinsidae; Perkinsus
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    Genomic context

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    See Pmar_PMAR019089 in Genome Data Viewer
    Exon count:
    5

    NW_003211397.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene retrovirus polyprotein, putative

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_003211397.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein import into nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in ribosomal subunit export from nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    GTP-binding nuclear protein ran/tc4, putative
    XP_002780190.1
    • encoded by transcript Pmar_PMAR019089-RA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    mRNA and Protein(s)

    1. XM_002780144.1 → XP_002780190.1  GTP-binding nuclear protein ran/tc4, putative [Perkinsus marinus ATCC 50983]

      See identical proteins and their annotated locations for XP_002780190.1

      UniProtKB/TrEMBL
      C5KTU3
      Conserved Domains (2) summary
      cd00877
      Location:10 → 175
      Ran; Ras-related nuclear proteins (Ran)/TC4 family of small GTPases
      PTZ00132
      Location:1 → 199
      PTZ00132; GTP-binding nuclear protein Ran; Provisional
    Nucleotide Protein
    Heading Accession and Version

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