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    PITG_11983 uncharacterized protein [ Phytophthora infestans T30-4 ]

    Gene ID: 9470967, updated on 17-May-2024

    Summary

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    Gene symbol
    PITG_11983
    Gene description
    uncharacterized protein
    Locus tag
    PITG_11983
    See related
    FungiDB:PITG_11983; VEuPathDB:PITG_11983
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Phytophthora infestans T30-4 (strain: T30-4)
    Lineage
    Eukaryota; Sar; Stramenopiles; Oomycota; Peronosporales; Peronosporaceae; Phytophthora
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    Genomic context

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    See PITG_11983 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    5

    NW_003303738.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene RXLR effector family protein, putative Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_003303738.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in intraciliary retrograde transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cilium IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of intraciliary transport particle A IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_003303738.1 Reference assembly

      Range
      1488597..1489516 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002901394.1 → XP_002901440.1  uncharacterized protein PITG_11983 [Phytophthora infestans T30-4]

      See identical proteins and their annotated locations for XP_002901440.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A833WJ43, D0NHP2
      Conserved Domains (1) summary
      pfam15305
      Location:73 → 207
      IFT43; Intraflagellar transport protein 43
    Nucleotide Protein
    Heading Accession and Version

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