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    SLC10A2 solute carrier family 10 member 2 [ Oryctolagus cuniculus (rabbit) ]

    Gene ID: 100009550, updated on 8-Mar-2024

    Summary

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    Gene symbol
    SLC10A2
    Gene description
    solute carrier family 10 member 2
    See related
    Ensembl:ENSOCUG00000005443
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Oryctolagus cuniculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
    Orthologs
    human mouse all
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    Genomic context

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    See SLC10A2 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 8 NC_067381.1 (7076216..7095464)

    Chromosome 8 - NC_067381.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103349106 Neighboring gene mini-chromosome maintenance complex-binding protein-like Neighboring gene putative methyltransferase-like protein 21E Neighboring gene ERCC excision repair 5, endonuclease

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_067381.1 Chromosome 8 Reference UM_NZW_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables bile acid:sodium symporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in bile acid and bile salt transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in apical plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ileal sodium/bile acid cotransporter
    Names
    ASBT
    IBAT
    ISBT
    Na(+)-dependent ileal bile acid transporter
    apical sodium-dependent bile acid transporter
    ileal Na(+)/bile acid cotransporter
    ileal sodium-dependent bile acid transporter
    sodium/taurocholate cotransporting polypeptide, ileal
    solute carrier family 10 (sodium/bile acid cotransporter family), member 2
    solute carrier family 10 (sodium/bile acid cotransporter), member 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001082764.1 → NP_001076233.1  ileal sodium/bile acid cotransporter

      See identical proteins and their annotated locations for NP_001076233.1

      Status: PROVISIONAL

      Source sequence(s)
      AJ002005
      UniProtKB/Swiss-Prot
      Q28727
      UniProtKB/TrEMBL
      A0A5F9CPK7
      Related
      ENSOCUP00000004722.3, ENSOCUT00000005444.4
      Conserved Domains (1) summary
      TIGR00841
      Location:30 → 316
      bass; bile acid transporter

    RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UM_NZW_1.0 Primary Assembly

    Genomic

    1. NC_067381.1 Reference UM_NZW_1.0 Primary Assembly

      Range
      7076216..7095464
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q28727.1 GenPept UniProtKB/Swiss-Prot:Q28727

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