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    LOC9662717 homeobox protein knotted-1-like 10 [ Selaginella moellendorffii ]

    Gene ID: 9662717, updated on 22-Oct-2023

    Summary

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    Gene symbol
    LOC9662717
    Gene description
    homeobox protein knotted-1-like 10
    Locus tag
    SELMODRAFT_159366
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Selaginella moellendorffii
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Lycopodiopsida; Selaginellales; Selaginellaceae; Selaginella
    Also known as
    SmKN2-1
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    Genomic context

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    See LOC9662717 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    100 current v1.0 (GCF_000143415.4) Unplaced Scaffold NW_003314348.1 (646426..650039, complement)

    NW_003314348.1Genomic Context describing neighboring genes Neighboring gene UPF0603 protein Os05g0401100, chloroplastic Neighboring gene acyl-lipid (8-3)-desaturase Neighboring gene malate dehydrogenase, cytoplasmic Neighboring gene uncharacterized LOC9636635

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_003314348 Unplaced Scaffold Reference v1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    homeobox protein knotted-1-like 10
    Names
    KNOX transcription factor

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Selaginella moellendorffii Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference v1.0

    Genomic

    1. NW_003314348.1 Reference v1.0

      Range
      646426..650039 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024662110.1 → XP_024517878.1  homeobox protein knotted-1-like 10 isoform X2

      Conserved Domains (3) summary
      pfam03790
      Location:154 → 193
      KNOX1; KNOX1 domain
      pfam03791
      Location:205 → 251
      KNOX2; KNOX2 domain
      pfam05920
      Location:347 → 386
      Homeobox_KN; Homeobox KN domain

    2. XM_002988279.2 → XP_002988325.1  homeobox protein knotted-1-like 10 isoform X1

      See identical proteins and their annotated locations for XP_002988325.1

      UniProtKB/TrEMBL
      D8SY74
      Conserved Domains (3) summary
      pfam03790
      Location:154 → 198
      KNOX1; KNOX1 domain
      pfam03791
      Location:210 → 256
      KNOX2; KNOX2 domain
      pfam05920
      Location:352 → 391
      Homeobox_KN; Homeobox KN domain
    Nucleotide Protein
    Heading Accession and Version

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