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    NECHADRAFT_40444 hypothetical protein [ Fusarium vanettenii 77-13-4 ]

    Gene ID: 9667378, updated on 17-May-2024

    Summary

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    Gene symbol
    NECHADRAFT_40444
    Gene description
    hypothetical protein
    Locus tag
    NECHADRAFT_40444
    See related
    FungiDB:NECHADRAFT_40444; VEuPathDB:NECHADRAFT_40444
    Gene type
    protein coding
    RNA name
    uncharacterized protein
    RefSeq status
    PROVISIONAL
    Organism
    Fusarium vanettenii 77-13-4 (isolate: 77-13-4, culture-collection: FGSC:9596)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Hypocreales; Nectriaceae; Fusarium; Fusarium solani species complex; Fusarium vanettenii
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    Genomic context

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    See NECHADRAFT_40444 in Genome Data Viewer
    Location:
    chromosome: 5, map: unlocalized
    Exon count:
    3

    NW_003315872.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_003315872.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The genome of Nectria haematococca: contribution of supernumerary chromosomes to gene expansion. Coleman JJ, et al. PLoS Genet, 2009 Aug. PMID 19714214, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 5'-3' exonuclease activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables 5'-flap endonuclease activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    hypothetical protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_003315872.1 Reference assembly

      Range
      872242..873535 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003048160.1 → XP_003048206.1  uncharacterized protein NECHADRAFT_40444 [Fusarium vanettenii 77-13-4]

      See identical proteins and their annotated locations for XP_003048206.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      C7Z125
      Conserved Domains (3) summary
      cd09907
      Location:221 → 293
      H3TH_FEN1-Euk; H3TH domain of Flap Endonuclease-1, a structure-specific, divalent-metal-ion dependent, 5' nuclease: Eukaryotic homologs
      cd09867
      Location:4 → 349
      PIN_FEN1; PIN domain of Flap Endonuclease-1, a structure-specific, divalent-metal-ion dependent, 5' nuclease and homologs
      PTZ00217
      Location:1 → 361
      PTZ00217; flap endonuclease-1; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    C7Z125.1

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