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    CHLNCDRAFT_143310 hypothetical protein [ Chlorella variabilis ]

    Gene ID: 17356773, updated on 28-Dec-2023

    Summary

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    Gene symbol
    CHLNCDRAFT_143310
    Gene description
    hypothetical protein
    Locus tag
    CHLNCDRAFT_143310
    Gene type
    protein coding
    RNA name
    hypothetical protein
    RefSeq status
    PROVISIONAL
    Organism
    Chlorella variabilis (strain: NC64A)
    Lineage
    Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Chlorellaceae; Chlorella
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    Genomic context

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    See CHLNCDRAFT_143310 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    10

    NW_005435083.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_005435083.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Chlorella variabilis NC64A genome reveals adaptation to photosymbiosis, coevolution with viruses, and cryptic sex. Blanc G, et al. Plant Cell, 2010 Sep. PMID 20852019, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables alternative oxidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in alternative respiration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    hypothetical protein
    XP_005849955.1
    • similar to alternative oxidase 1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_005435083.1 Reference assembly

      Range
      2138385..2140426 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005849893.1 → XP_005849955.1  hypothetical protein CHLNCDRAFT_143310 [Chlorella variabilis]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      E1Z9Y0
      Conserved Domains (1) summary
      pfam01786
      Location:52 → 271
      AOX; Alternative oxidase
    Nucleotide Protein
    Heading Accession and Version

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