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    CHLNCDRAFT_137564 hypothetical protein [ Chlorella variabilis ]

    Gene ID: 17358389, updated on 28-Dec-2023

    Summary

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    Gene symbol
    CHLNCDRAFT_137564
    Gene description
    hypothetical protein
    Locus tag
    CHLNCDRAFT_137564
    Gene type
    protein coding
    RNA name
    hypothetical protein
    RefSeq status
    PROVISIONAL
    Organism
    Chlorella variabilis (strain: NC64A)
    Lineage
    Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Chlorellaceae; Chlorella
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    Genomic context

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    Location:
    chromosome: Unknown
    Exon count:
    4

    NW_005435086.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_005435086.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Chlorella variabilis NC64A genome reveals adaptation to photosymbiosis, coevolution with viruses, and cryptic sex. Blanc G, et al. Plant Cell, 2010 Sep. PMID 20852019, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 3-hydroxyacyl-CoA dehydratase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in fatty acid elongation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sphingolipid biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in very long-chain fatty acid biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    hypothetical protein
    XP_005851362.1
    • similar to Os05g0460800

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_005435086.1 Reference assembly

      Range
      113743..114913 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005851300.1 → XP_005851362.1  hypothetical protein CHLNCDRAFT_137564 [Chlorella variabilis]

      See identical proteins and their annotated locations for XP_005851362.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      E1Z3Z4
      Conserved Domains (1) summary
      pfam04387
      Location:54 → 213
      PTPLA; Protein tyrosine phosphatase-like protein, PTPLA
    Nucleotide Protein
    Heading Accession and Version

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