U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    PICST_85387 Adenylosuccinate synthetase (IMP--aspartate ligase) [ Scheffersomyces stipitis CBS 6054 ]

    Gene ID: 4840768, updated on 21-Dec-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    PICST_85387
    Gene description
    Adenylosuccinate synthetase (IMP--aspartate ligase)
    Locus tag
    PICST_85387
    Gene type
    protein coding
    RNA name
    predicted protein
    RefSeq status
    PROVISIONAL
    Organism
    Scheffersomyces stipitis CBS 6054 (strain: CBS 6054)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Scheffersomyces
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See PICST_85387 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    1
    Sequence:
    Chromosome: 7; NC_009047.1 (212523..214522)

    Chromosome 7 - NC_009047.1Genomic Context describing neighboring genes Neighboring gene predicted protein Neighboring gene isocitrate dehydrogenase Neighboring gene predicted protein Neighboring gene predicted protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_009047.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Genome sequence of the lignocellulose-bioconverting and xylose-fermenting yeast Pichia stipitis. Jeffries TW, et al. Nat Biotechnol, 2007 Mar. PMID 17334359
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables adenylosuccinate synthase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in 'de novo' AMP biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in IMP metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Names
    Adenylosuccinate synthetase (IMP--aspartate ligase)
    XP_001386058.1
    • go_function adenylosuccinate synthase activity; GTP binding
      go_process purine nucleotide biosynthesis

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_009047.1 Reference assembly

      Range
      212523..214522
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001386021.1 → XP_001386058.1  Adenylosuccinate synthetase (IMP--aspartate ligase) [Scheffersomyces stipitis CBS 6054]

      See identical proteins and their annotated locations for XP_001386058.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      A3LYS9
      Conserved Domains (1) summary
      pfam00709
      Location:4 → 424
      Adenylsucc_synt; Adenylosuccinate synthetase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A3LYS9.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials