U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    LEPA protein-synthesizing GTPase [ Micromonas pusilla CCMP1545 ]

    Gene ID: 9687434, updated on 1-Feb-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    LEPA
    Gene description
    protein-synthesizing GTPase
    Locus tag
    MICPUCDRAFT_51778
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Micromonas pusilla CCMP1545 (strain: CCMP1545)
    Lineage
    Eukaryota; Viridiplantae; Chlorophyta; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LEPA in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    3

    NW_003315892.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NW_003315892.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Green evolution and dynamic adaptations revealed by genomes of the marine picoeukaryotes Micromonas. Worden AZ, et al. Science, 2009 Apr 10. PMID 19359590
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ribosome binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    protein-synthesizing GTPase
    XP_003062197.1
    • Part of the G-protein superfamily Has elongation factor Tu GTP binding domain 1 and 2, in addition to elongation factor G C-terminus (at C-terminus) as well as GTP-binding protein LepA C-terminus domain

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_003315892.1 Reference assembly

      Range
      635517..637946 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003062151.1 → XP_003062197.1  protein-synthesizing GTPase [Micromonas pusilla CCMP1545]

      See identical proteins and their annotated locations for XP_003062197.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      C1N1Y2
      UniProtKB/TrEMBL
      A0A7R9T7N7
      Conserved Domains (1) summary
      COG0481
      Location:83 → 697
      LepA; Translation elongation factor EF-4, membrane-bound GTPase [Translation, ribosomal structure and biogenesis]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    C1N1Y2.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials