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    CG42675 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 40722, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG42675provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0261561
    Locus tag
    Dmel_CG42675
    See related
    AllianceGenome:FB:FBgn0261561
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    anon-WO0140519.247; CG10999; CG31554; Dmel\CG42675
    Old locus tag
    Dmel_CG10999; Dmel_CG31554
    Summary
    Orthologous to human ZC2HC1A (zinc finger C2HC-type containing 1A) and ZC2HC1B (zinc finger C2HC-type containing 1B). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG42675 in Genome Data Viewer
    Location:
    83C4-83C4; 3-47.5 cM
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (5813609..5818820)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (1639331..1644542)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Hpr1 Neighboring gene uncharacterized protein Neighboring gene Secretory 20 Neighboring gene degringolade

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of ALK in Thinness. Orthofer M, et al. Cell, 2020 Jun 11. PMID 32442405
    2. Clockwork Orange is a transcriptional repressor and a new Drosophila circadian pacemaker component. Kadener S, et al. Genes Dev, 2007 Jul 1. PMID 17578907, Free PMC Article
    3. A direct role for cohesin in gene regulation and ecdysone response in Drosophila salivary glands. Pauli A, et al. Curr Biol, 2010 Oct 26. PMID 20933422, Free PMC Article
    4. Crtc modulates fasting programs associated with 1-C metabolism and inhibition of insulin signaling. Wang T, et al. Proc Natl Acad Sci U S A, 2021 Mar 23. PMID 33723074, Free PMC Article
    5. CRISPR/Cas9 mediated genetic resource for unknown kinase and phosphatase genes in Drosophila. Wu M, et al. Sci Rep, 2020 Apr 30. PMID 32355295, Free PMC Article

    See all (26) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG42675-PB
    CG42675-PC
    CG42675-PD
    CG42675-PE
    CG42675-PF
    CG42675-PG

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      5813609..5818820
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001202252.3 → NP_001189181.1  uncharacterized protein Dmel_CG42675, isoform F [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001189181.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8SXA7, Q9VNI7
      Conserved Domains (1) summary
      pfam13913
      Location:227 → 247
      zf-C2HC_2; zinc-finger of a C2HC-type

    2. NM_141336.2 → NP_649593.1  uncharacterized protein Dmel_CG42675, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_649593.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8SXA7, Q9VNI7
      Related
      FBpp0291864
      Conserved Domains (1) summary
      pfam13913
      Location:227 → 247
      zf-C2HC_2; zinc-finger of a C2HC-type

    3. NM_169109.2 → NP_731012.1  uncharacterized protein Dmel_CG42675, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_731012.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8SXA7, Q9VNI7
      Related
      FBpp0291865
      Conserved Domains (1) summary
      pfam13913
      Location:227 → 247
      zf-C2HC_2; zinc-finger of a C2HC-type

    4. NM_001202251.2 → NP_001189180.1  uncharacterized protein Dmel_CG42675, isoform E [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001189180.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      C9QPD4, Q8SXA7
      Conserved Domains (1) summary
      pfam13913
      Location:256 → 276
      zf-C2HC_2; zinc-finger of a C2HC-type

    5. NM_001275373.1 → NP_001262302.1  uncharacterized protein Dmel_CG42675, isoform G [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001262302.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0B4KGL2, Q8SXA7
      Conserved Domains (1) summary
      pfam13913
      Location:271 → 291
      zf-C2HC_2; zinc-finger of a C2HC-type

    6. NM_169111.2 → NP_731014.1  uncharacterized protein Dmel_CG42675, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_731014.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8IPQ7
      Related
      FBpp0291866
      Conserved Domains (1) summary
      pfam13913
      Location:31 → 51
      zf-C2HC_2; zinc-finger of a C2HC-type
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A0A0B4KGL2 A0A0B4KGL2
    C9QPD4 C9QPD4
    Q8IPQ7 Q8IPQ7
    Q8SXA7 Q8SXA7
    Q9VNI7 Q9VNI7

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