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    CG42818 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 10178877, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG42818provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0262000
    Locus tag
    Dmel_CG42818
    See related
    AllianceGenome:FB:FBgn0262000
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BG:DS07473.1; CG12455; Dmel\CG42818; DS07473.1A
    Old locus tag
    Dmel_CG12455
    Summary
    Is expressed in adult head and adult heart. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG42818 in Genome Data Viewer
    Location:
    35F1-35F1; 2-52 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (16241939..16245559)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (16241939..16245559)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR43840 Neighboring gene Ca[2+] channel Muscle-specific alpha2/delta subunit Neighboring gene uncharacterized protein Neighboring gene PRL-1 phosphatase Neighboring gene Endonuclease G inhibitor Neighboring gene twine

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. straightjacket is required for the synaptic stabilization of cacophony, a voltage-gated calcium channel alpha1 subunit. Ly CV, et al. J Cell Biol, 2008 Apr 7. PMID 18391075, Free PMC Article
    2. Two types of Ca2+ channel linked to two endocytic pathways coordinately maintain synaptic transmission at the Drosophila synapse. Kuromi H, et al. Eur J Neurosci, 2010 Aug. PMID 20704589
    3. Neighbourhood continuity is not required for correct testis gene expression in Drosophila. Meadows LA, et al. PLoS Biol, 2010 Nov 30. PMID 21151342, Free PMC Article
    4. Cache - a signaling domain common to animal Ca(2+)-channel subunits and a class of prokaryotic chemotaxis receptors. Anantharaman V, et al. Trends Biochem Sci, 2000 Nov. PMID 11084361
    5. An exploration of the sequence of a 2.9-Mb region of the genome of Drosophila melanogaster: the Adh region. Ashburner M, et al. Genetics, 1999 Sep. PMID 10471707, Free PMC Article

    See all (23) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG42818-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      16241939..16245559
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001201892.2 → NP_001188821.1  uncharacterized protein Dmel_CG42818 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001188821.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9MSI7
      Conserved Domains (1) summary
      PHA03255
      Location:642 → 763
      PHA03255; BDLF3; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    M9MSI7 M9MSI7

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