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    DICPUDRAFT_157468 uncharacterized protein [ Dictyostelium purpureum ]

    Gene ID: 10508746, updated on 17-May-2024

    Summary

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    Gene symbol
    DICPUDRAFT_157468
    Gene description
    uncharacterized protein
    Locus tag
    DICPUDRAFT_157468
    See related
    AmoebaDB:DICPUDRAFT_157468; VEuPathDB:DICPUDRAFT_157468
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Dictyostelium purpureum (strain: QSDP1)
    Lineage
    Eukaryota; Amoebozoa; Evosea; Eumycetozoa; Dictyostelia; Dictyosteliales; Dictyosteliaceae; Dictyostelium
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    Genomic context

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    See DICPUDRAFT_157468 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    6

    NW_003519700.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_003519700.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in transcription elongation by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of elongin complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein
    XP_003292720.1
    • hypothetical protein DDBDRAFT_0190721

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_003519700.1 Reference assembly

      Range
      17998..20925 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003292672.1 → XP_003292720.1  uncharacterized protein DICPUDRAFT_157468 [Dictyostelium purpureum]

      See identical proteins and their annotated locations for XP_003292720.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      F0ZZ73
      Conserved Domains (7) summary
      cd00116
      Location:196 → 299
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      sd00033
      Location:202 → 225
      LRR_RI; leucine-rich repeat [structural motif]
      pfam01302
      Location:14 → 79
      CAP_GLY; CAP-Gly domain
      pfam06881
      Location:414 → 515
      Elongin_A; RNA polymerase II transcription factor SIII (Elongin) subunit A
      pfam12799
      Location:284 → 323
      LRR_4; Leucine Rich repeats (2 copies)
      pfam13855
      Location:200 → 261
      LRR_8; Leucine rich repeat
      cl19115
      Location:296 → 370
      Cupredoxin; Cupredoxin superfamily
    Nucleotide Protein
    Heading Accession and Version

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