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    STAT1 signal transducer and activator of transcription 1 [ Meleagris gallopavo (turkey) ]

    Gene ID: 100544816, updated on 11-Apr-2024

    Summary

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    Gene symbol
    STAT1
    Gene description
    signal transducer and activator of transcription 1
    See related
    Ensembl:ENSMGAG00000006382
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Meleagris gallopavo
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Meleagridinae; Meleagris
    Orthologs
    human mouse all
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    Genomic context

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    See STAT1 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    24
    Annotation release Status Assembly Chr Location
    103 current Turkey_5.1 (GCF_000146605.3) 7 NC_015017.2 (7403114..7423109, complement)
    Build 1.1 previous assembly Turkey_2.01 (GCF_000146605.1) 7 NC_015017.1 (7919110..7937771, complement)

    Chromosome 7 - NC_015017.2Genomic Context describing neighboring genes Neighboring gene NGFI-A binding protein 1 Neighboring gene glutaminase Neighboring gene uncharacterized LOC109368473 Neighboring gene signal transducer and activator of transcription 4 Neighboring gene uncharacterized LOC116216801

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell surface receptor signaling pathway via JAK-STAT IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in defense response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of cell population proliferation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to peptide hormone IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in type I interferon-mediated signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    signal transducer and activator of transcription 1-alpha/beta

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Meleagris gallopavo Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Turkey_5.1 Primary Assembly

    Genomic

    1. NC_015017.2 Reference Turkey_5.1 Primary Assembly

      Range
      7403114..7423109 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003207430.4 → XP_003207478.1  signal transducer and activator of transcription 1-alpha/beta

      UniProtKB/TrEMBL
      G1N4C3
      Related
      ENSMGAP00000022718.1, ENSMGAT00000029563.1
      Conserved Domains (5) summary
      cd10372
      Location:587 → 735
      SH2_STAT1; Src homology 2 (SH2) domain found in signal transducer and activator of transcription (STAT) 1 proteins
      smart00964
      Location:28 → 146
      STAT_int; STAT protein, protein interaction domain
      cd16851
      Location:166 → 341
      STAT1_CCD; Coiled-coil domain of Signal Transducer and Activator of Transcription 1 (STAT1)
      cd16845
      Location:345 → 505
      STAT1_DBD; DNA-binding domain of Signal Transducer and Activator of Transcription 1 (STAT1)
      pfam12162
      Location:743 → 767
      STAT1_TAZ2bind; STAT1 TAZ2 binding domain
    Nucleotide Protein
    Heading Accession and Version

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