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    BTBD8 BTB domain containing 8 [ Nomascus leucogenys (northern white-cheeked gibbon) ]

    Gene ID: 100587910, updated on 8-Mar-2024

    Summary

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    Gene symbol
    BTBD8
    Gene description
    BTB domain containing 8
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Nomascus leucogenys
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
    Orthologs
    human mouse all
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    Genomic context

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    See BTBD8 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    103 current Asia_NLE_v1 (GCF_006542625.1) 12 NC_044392.1 (82438834..82552504, complement)
    102 previous assembly Nleu_3.0 (GCF_000146795.2) 12 NC_019827.1 (84646596..84716031, complement)

    Chromosome 12 - NC_044392.1Genomic Context describing neighboring genes Neighboring gene chromosome 12 C1orf146 homolog Neighboring gene actin, alpha skeletal muscle-like Neighboring gene cAMP-dependent protein kinase type I-alpha regulatory subunit pseudogene Neighboring gene glyceraldehyde-3-phosphate dehydrogenase pseudogene Neighboring gene lysophosphatidylcholine acyltransferase 2B-like Neighboring gene SET like protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in neuron projection terminus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in synaptic vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    BTB/POZ domain-containing protein 8

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Asia_NLE_v1 Primary Assembly

    Genomic

    1. NC_044392.1 Reference Asia_NLE_v1 Primary Assembly

      Range
      82438834..82552504 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003260048.3 → XP_003260096.2  BTB/POZ domain-containing protein 8 isoform X1

      UniProtKB/TrEMBL
      G1RHI0
      Conserved Domains (2) summary
      pfam15363
      Location:1411 → 1455
      DUF4596; Domain of unknown function (DUF4596)
      cl28903
      Location:1 → 40
      BACK; BACK (BTB and C-terminal Kelch) domain

    2. XM_003260047.2 → XP_003260095.1  BTB/POZ domain-containing protein 8 isoform X2

      UniProtKB/TrEMBL
      G1RHH2
      Conserved Domains (3) summary
      cd18285
      Location:43 → 147
      BTB1_POZ_BTBD8; first BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in BTB/POZ domain-containing protein 8 (BTBD8)
      cd18286
      Location:189 → 309
      BTB2_POZ_BTBD8; second BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in BTB/POZ domain-containing protein 8 (BTBD8)
      cd18490
      Location:316 → 378
      BACK_BTBD8; BACK (BTB and C-terminal Kelch) domain found in BTB/POZ domain-containing protein 8 (BTBD8)
    Nucleotide Protein
    Heading Accession and Version

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