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    C2H1orf146 chromosome 2 C1orf146 homolog [ Monodelphis domestica (gray short-tailed opossum) ]

    Gene ID: 100026346, updated on 8-Mar-2024

    Summary

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    Gene symbol
    C2H1orf146
    Gene description
    chromosome 2 C1orf146 homolog
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Monodelphis domestica
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis
    Orthologs
    human mouse all
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    Genomic context

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    See C2H1orf146 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2023_05 current mMonDom1.pri (GCF_027887165.1) 2 NC_077228.1 (35516137..35535769, complement)
    103 previous assembly MonDom5 (GCF_000002295.2) 2 NC_008802.1 (12070306..12089551, complement)

    Chromosome 2 - NC_077228.1Genomic Context describing neighboring genes Neighboring gene growth factor independent 1 transcriptional repressor Neighboring gene uncharacterized LOC130457069 Neighboring gene RNA polymerase II associated protein 2 Neighboring gene glomulin, FKBP associated protein Neighboring gene BTB domain containing 8 Neighboring gene uncharacterized LOC130457070 Neighboring gene epoxide hydrolase 4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in reciprocal meiotic recombination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in synaptonemal complex assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chromosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein SPO16 homolog
    Names
    uncharacterized protein C1orf146 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_027887165.1-RS_2023_05

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mMonDom1.pri

    Genomic

    1. NC_077228.1 Reference mMonDom1.pri

      Range
      35516137..35535769 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001376953.5 → XP_001376990.2  protein SPO16 homolog

      Conserved Domains (1) summary
      pfam15162
      Location:10 → 171
      DUF4580; Domain of unknown function (DUF4580)
    Nucleotide Protein
    Heading Accession and Version

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