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    THITE_2114393 uncharacterized protein [ Thermothielavioides terrestris NRRL 8126 ]

    Gene ID: 11516996, updated on 14-Dec-2023

    Summary

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    Gene symbol
    THITE_2114393
    Gene description
    uncharacterized protein
    Locus tag
    THITE_2114393
    Gene type
    protein coding
    RNA name
    uncharacterized protein
    RefSeq status
    PROVISIONAL
    Organism
    Thermothielavioides terrestris NRRL 8126 (strain: NRRL 8126)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Chaetomiaceae; Thermothielavioides; Thermothielavioides terrestris
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    Genomic context

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    See THITE_2114393 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    3
    Sequence:
    Chromosome: 2; NC_016458.1 (5485241..5487559, complement)

    Chromosome 2 - NC_016458.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_016458.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Comparative genomic analysis of the thermophilic biomass-degrading fungi Myceliophthora thermophila and Thielavia terrestris. Berka RM, et al. Nat Biotechnol, 2011 Oct 2. PMID 21964414
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphatidylinositol-3-phosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of ESCRT II complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in late endosome membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_016458.1 Reference assembly

      Range
      5485241..5487559 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003652641.1 → XP_003652689.1  uncharacterized protein THITE_2114393 [Thermothielavioides terrestris NRRL 8126]

      See identical proteins and their annotated locations for XP_003652689.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A3S4ATB3, G2QZM4
      Conserved Domains (6) summary
      smart00547
      Location:247 → 268
      ZnF_RBZ; Zinc finger domain
      PHA03247
      Location:113 → 362
      PHA03247; large tegument protein UL36; Provisional
      sd00029
      Location:144 → 176
      zf-RanBP2; RanBP2-type Zn finger [structural motif]
      pfam04157
      Location:373 → 615
      EAP30; EAP30/Vps36 family
      pfam16988
      Location:136 → 202
      Vps36-NZF-N; Vacuolar protein sorting 36 NZF-N zinc-finger domain
      cl17171
      Location:6 → 148
      PH-like; Pleckstrin homology-like domain
    Nucleotide Protein
    Heading Accession and Version

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