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    LOC100836187 F-box/kelch-repeat protein At1g30090 [ Brachypodium distachyon (stiff brome) ]

    Gene ID: 100836187, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC100836187
    Gene description
    F-box/kelch-repeat protein At1g30090
    Locus tag
    BRADI_1g58530v3
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Brachypodium distachyon
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Stipodae; Brachypodieae; Brachypodium
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    Genomic context

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    See LOC100836187 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    103 current Brachypodium_distachyon_v3.0 (GCF_000005505.3) 1 NC_016131.3 (57541151..57543373, complement)
    102 previous assembly Brachypodium_distachyon_v2.0 (GCF_000005505.2) 1 NC_016131.2 (57595867..57598082, complement)

    Chromosome 1 - NC_016131.3Genomic Context describing neighboring genes Neighboring gene protein STRICTOSIDINE SYNTHASE-LIKE 10-like Neighboring gene NAC domain-containing protein 83 Neighboring gene uncharacterized LOC104582331 Neighboring gene uncharacterized LOC104581738

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    F-box/kelch-repeat protein At1g30090

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Brachypodium distachyon Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Brachypodium_distachyon_v3.0 Primary Assembly

    Genomic

    1. NC_016131.3 Reference Brachypodium_distachyon_v3.0 Primary Assembly

      Range
      57541151..57543373 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003557606.4 → XP_003557654.1  F-box/kelch-repeat protein At1g30090

      UniProtKB/TrEMBL
      I1H439
      Conserved Domains (4) summary
      smart00612
      Location:161 → 208
      Kelch; Kelch domain
      sd00038
      Location:148 → 194
      Kelch; KELCH repeat [structural motif]
      pfam00646
      Location:53 → 97
      F-box; F-box domain
      pfam01344
      Location:197 → 243
      Kelch_1; Kelch motif
    Nucleotide Protein Strain
    Heading Accession and Version

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