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    TDEL0A04090 TATA-binding protein-associated factor TAF11 [ Torulaspora delbrueckii ]

    Gene ID: 11503188, updated on 6-Dec-2024

    Summary

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    Gene symbol
    TDEL0A04090
    Gene description
    TATA-binding protein-associated factor TAF11
    Locus tag
    TDEL_0A04090
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Torulaspora delbrueckii (strain: type strain:CBS 1146)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Torulaspora
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    Genomic context

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    See TDEL0A04090 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    1
    Sequence:
    Chromosome: 1; NC_016501.1 (729571..730575)

    Chromosome 1 - NC_016501.1Genomic Context describing neighboring genes Neighboring gene tRNA (carboxymethyluridine(34)-5-O)-methyltransferase Neighboring gene GPI-anchor transamidase GPI17 Neighboring gene leucine carboxy methyltransferase Neighboring gene salt homeostasis regulator

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_016501.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolutionary erosion of yeast sex chromosomes by mating-type switching accidents. Gordon JL, et al. Proc Natl Acad Sci U S A, 2011 Dec 13. PMID 22123960, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein heterodimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription coactivator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in RNA polymerase II preinitiation complex assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in transcription initiation at RNA polymerase II promoter IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of transcription factor TFIID complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    TATA-binding protein-associated factor TAF11
    XP_003678952.1
    • similar to Saccharomyces cerevisiae TAF11 (YML015C); ancestral locus Anc_5.546

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_016501.1 Reference assembly

      Range
      729571..730575
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003678904.1 → XP_003678952.1  TATA-binding protein-associated factor TAF11 [Torulaspora delbrueckii]

      See identical proteins and their annotated locations for XP_003678952.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      G8ZM97
      Conserved Domains (2) summary
      COG5251
      Location:31 → 207
      TAF40; Transcription initiation factor TFIID, subunit TAF11 [Transcription]
      pfam04719
      Location:124 → 203
      TAFII28; hTAFII28-like protein conserved region
    Nucleotide Protein
    Heading Accession and Version

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