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    yjdE putative APC family putrescine/ornithine transport protein [ Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ]

    Gene ID: 1255820, updated on 17-Dec-2024

    Summary

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    Gene symbol
    yjdE
    Gene description
    putative APC family putrescine/ornithine transport protein
    Locus tag
    STM4294
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (strain: LT2, serovar: Typhimurium, sub-species: enterica, culture-collection: ATCC:700720, culture-collection: SGSC:1412, type-material: type strain of Salmonella enterica)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella
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    Genomic context

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    Sequence:
    NC_003197.2 (4536177..4537528, complement)

    NC_003197.2Genomic Context describing neighboring genes Neighboring gene sensory kinase in two-component regulatory system with BasR Neighboring gene response regulator in two-component regulatory system with BasS Neighboring gene putative integral membrane protein Neighboring gene transcriptional activator of adiA Neighboring gene arginine decarboxylase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003197.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Complete genome sequence of Salmonella enterica serovar Typhimurium LT2. McClelland M, et al. Nature, 2001 Oct 25. PMID 11677609

    GeneRIFs: Gene References Into Functions

    General gene information

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    regulatory

    • Loc: c4537528-4537523 regulatory_class = ribosome_binding_site

    General protein information

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    Preferred Names
    putative APC family putrescine/ornithine transport protein
    NP_463159.1
    • cryptic; similar to E. coli putative amino acid/amine transport protein, cryptic (AAC77076.1); Blastp hit to AAC77076.1 (445 aa), 94% identity in aa 1 - 445

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003197.2 Reference assembly

      Range
      4536177..4537528 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_463159.1 putative APC family putrescine/ornithine transport protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]

      See identical proteins and their annotated locations for NP_463159.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A5H9YK01, A0A5U0QJS9, A0A5V0NTW2, A0A5W1G4H8, A0A5Y0RZA7, A0A5Y7T320, A0A657I0Z0, A0A6X6WD48, A0A6Y1Y337, A0A6Y5JTY8, A0A715V474, A0A717IMW7, A0A717TK60, A0A722N434, A0A726TU83, A0A735M7R6, A0A735Q0W9, A0A736N470, A0A738AL47, A0A744MVN5, A0A745D609, A0A745HBB3, A0A753PML1, A0A759HN21
      Conserved Domains (1) summary
      PRK10644
      Location:1 → 445
      PRK10644; arginine/agmatine antiporter
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P60066.1

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