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    LOC100136729 monoamine oxidase [ Oncorhynchus mykiss (rainbow trout) ]

    Gene ID: 100136729, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC100136729
    Gene description
    monoamine oxidase
    See related
    Ensembl:ENSOMYG00000026860
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Oncorhynchus mykiss
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
    Annotation information
    Annotation category: partial on reference assembly
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    Genomic context

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    See LOC100136729 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    101 current USDA_OmykA_1.1 (GCF_013265735.2) 3 NC_048567.1 (74496189..74562871, complement)
    100 previous assembly Omyk_1.0 (GCF_002163495.1) 3 NC_035079.1 (76764078..76822096, complement)

    Chromosome 3 - NC_048567.1Genomic Context describing neighboring genes Neighboring gene peripheral plasma membrane protein CASK Neighboring gene probable G-protein coupled receptor 82 Neighboring gene gamma-crystallin M3-like Neighboring gene norrin Neighboring gene uncharacterized LOC110520586

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Cloning of a novel monoamine oxidase cDNA from trout liver. Chen K, et al. Mol Pharmacol, 1994 Dec. PMID 7808446
    2. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    amine oxidase [flavin-containing]
    Names
    Amine oxidase
    NP_001118160.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001124688.1 → NP_001118160.1  amine oxidase [flavin-containing]

      See identical proteins and their annotated locations for NP_001118160.1

      Status: PROVISIONAL

      Source sequence(s)
      L37878
      UniProtKB/Swiss-Prot
      P49253
      Related
      ENSOMYP00000058298.2, ENSOMYT00000063461.2
      Conserved Domains (2) summary
      pfam01593
      Location:16 → 453
      Amino_oxidase; Flavin containing amine oxidoreductase
      pfam13450
      Location:11 → 76
      NAD_binding_8; NAD(P)-binding Rossmann-like domain

    RefSeqs of Annotated Genomes: Oncorhynchus mykiss Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference USDA_OmykA_1.1 Primary Assembly

    Genomic

    1. NC_048567.1 Reference USDA_OmykA_1.1 Primary Assembly

      Range
      74496189..74562871 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P49253.2 GenPept UniProtKB/Swiss-Prot:P49253

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