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    C54D10.4 RDS/peripherin-like protein xRDS35 [ Caenorhabditis elegans ]

    Gene ID: 183781, updated on 9-Dec-2024

    Summary

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    Official Symbol
    C54D10.4
    Official Full Name
    RDS/peripherin-like protein xRDS35
    Primary source
    WormBase:WBGene00008299
    Locus tag
    CELE_C54D10.4
    See related
    AllianceGenome:WB:WBGene00008299
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. Predicted to be active in plasma membrane. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See C54D10.4 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    6
    Sequence:
    Chromosome: V; NC_003283.11 (12419413..12420943, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene CaDmium Responsive Neighboring gene CaDmium Responsive Neighboring gene ShKT domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    RDS/peripherin-like protein xRDS35
    NP_506117.3
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      12419413..12420943 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_073716.6 → NP_506117.3  RDS/peripherin-like protein xRDS35 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_506117.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q18833
      Conserved Domains (1) summary
      cl02781
      Location:172 → 239
      tetraspanin_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL). Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the ...
    Nucleotide Protein
    Heading Accession and Version

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