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    EPO erythropoietin [ Sarcophilus harrisii (Tasmanian devil) ]

    Gene ID: 100924490, updated on 8-Mar-2024

    Summary

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    Gene symbol
    EPO
    Gene description
    erythropoietin
    See related
    Ensembl:ENSSHAG00000008258
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sarcophilus harrisii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
    Orthologs
    human mouse all
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    Genomic context

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    See EPO in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    103 current mSarHar1.11 (GCF_902635505.1) 4 NC_045429.1 (288077357..288083406)
    102 previous assembly Devil_ref v7.0 (GCF_000189315.1) 4 Unlocalized Scaffold NW_003838874.1 (400569..404492, complement)

    Chromosome 4 - NC_045429.1Genomic Context describing neighboring genes Neighboring gene GRB10 interacting GYF protein 1 Neighboring gene POP7 homolog, ribonuclease P/MRP subunit Neighboring gene EPH receptor B4 Neighboring gene solute carrier family 12 member 9

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cytokine activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables erythropoietin receptor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables hormone activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    erythropoietin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mSarHar1.11 Primary Assembly

    Genomic

    1. NC_045429.1 Reference mSarHar1.11 Primary Assembly

      Range
      288077357..288083406
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003768844.2 → XP_003768892.1  erythropoietin

      UniProtKB/TrEMBL
      G3W289
      Related
      ENSSHAP00000009544.1, ENSSHAT00000009627.2
      Conserved Domains (1) summary
      pfam00758
      Location:30 → 190
      EPO_TPO; Erythropoietin/thrombopoietin
    Nucleotide Protein
    Heading Accession and Version

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