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    FBXL22 F-box and leucine rich repeat protein 22 [ Pan paniscus (pygmy chimpanzee) ]

    Gene ID: 100971645, updated on 8-Mar-2024

    Summary

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    Gene symbol
    FBXL22
    Gene description
    F-box and leucine rich repeat protein 22
    See related
    Ensembl:ENSPPAG00000043136
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan paniscus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs
    human mouse all
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    Genomic context

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    See FBXL22 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 16 NC_073265.2 (52845341..52854100)
    RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 15 NC_073264.1 (57021343..57030221)

    Chromosome 16 - NC_073265.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103783218 Neighboring gene uncharacterized LOC117976040 Neighboring gene ubiquitin specific peptidase 3 Neighboring gene HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 Neighboring gene death associated protein kinase 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of SCF ubiquitin ligase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    F-box and leucine-rich protein 22

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Genomic

    1. NC_073265.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

      Range
      52845341..52854100
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_034938898.4 → XP_034794789.1  F-box and leucine-rich protein 22 isoform X2

      Conserved Domains (3) summary
      cd09293
      Location:113 → 200
      AMN1; Antagonist of mitotic exit network protein 1
      sd00034
      Location:122 → 147
      LRR_AMN1; leucine-rich repeat [structural motif]
      pfam12937
      Location:9 → 49
      F-box-like

    2. XM_003827944.5 → XP_003827992.1  F-box and leucine-rich protein 22 isoform X1

      UniProtKB/TrEMBL
      A0A2R9CGD1
      Related
      ENSPPAP00000041015.1
      Conserved Domains (1) summary
      pfam12937
      Location:9 → 49
      F-box-like; F-box-like
    Nucleotide Protein
    Heading Accession and Version

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