U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    MYCGRDRAFT_41235 putative ABC transporter [ Zymoseptoria tritici IPO323 ]

    Gene ID: 13397113, updated on 14-Dec-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    MYCGRDRAFT_41235
    Gene description
    putative ABC transporter
    Locus tag
    MYCGRDRAFT_41235
    Gene type
    protein coding
    RNA name
    putative ABC transporter
    RefSeq status
    PROVISIONAL
    Organism
    Zymoseptoria tritici IPO323 (strain: IPO323, type-material: culture from epitype of Zymoseptoria tritici)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Dothideomycetidae; Capnodiales; Mycosphaerellaceae; Zymoseptoria
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See MYCGRDRAFT_41235 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    2
    Sequence:
    Chromosome: 4; NC_018215.1 (36524..40624)

    Chromosome 4 - NC_018215.1Genomic Context describing neighboring genes Neighboring gene putative siderophore biosynthesis Neighboring gene putative siderophore-dependent iron transporter Neighboring gene MFS1 putative major facilitator superfamily transporter Neighboring gene succinate dehydrogenase flavoprotein subunit

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_018215.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Finished genome of the fungal wheat pathogen Mycosphaerella graminicola reveals dispensome structure, chromosome plasticity, and stealth pathogenesis. Goodwin SB, et al. PLoS Genet, 2011 Jun. PMID 21695235, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ABC-type transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    putative ABC transporter
    XP_003852792.1
    • ABC transporter, ABC-C family, MRP type. TC3.A.1.208.These transporters mainly transport conjugated compounds and can be involved in metal resistance.

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_018215.1 Reference assembly

      Range
      36524..40624
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003852744.1 → XP_003852792.1  putative ABC transporter [Zymoseptoria tritici IPO323]

      See identical proteins and their annotated locations for XP_003852792.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      F9X9V4
      UniProtKB/TrEMBL
      A0A2H1GA96
      Conserved Domains (1) summary
      PLN03130
      Location:32 → 1337
      PLN03130; ABC transporter C family member; Provisional
    Protein Accession Links
    GenPept Link UniProtKB Link
    EGP87768.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases