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    PGTG_19583 YjeF [ Puccinia graminis f. sp. tritici CRL 75-36-700-3 ]

    Gene ID: 10534923, updated on 17-May-2024

    Summary

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    Gene symbol
    PGTG_19583
    Gene description
    YjeF
    Locus tag
    PGTG_19583
    See related
    FungiDB:PGTG_19583; VEuPathDB:PGTG_19583
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Puccinia graminis f. sp. tritici CRL 75-36-700-3 (strain: CRL 75-36-700-3, forma-specialis: tritici CRL 75-36-700-3)
    Lineage
    Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina; Pucciniomycetes; Pucciniales; Pucciniaceae; Puccinia
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    Genomic context

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    See PGTG_19583 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    7

    NW_003526688.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_003526688.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Comparative Analysis Highlights Variable Genome Content of Wheat Rusts and Divergence of the Mating Loci. Cuomo CA, et al. G3 (Bethesda), 2017 Feb 9. PMID 27913634, Free PMC Article
    2. Obligate biotrophy features unraveled by the genomic analysis of rust fungi. Duplessis S, et al. Proc Natl Acad Sci U S A, 2011 May 31. PMID 21536894, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP-dependent NAD(P)H-hydrate dehydratase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in metabolite repair IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    YjeF

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_003526688.1 Reference assembly

      Range
      4645..6648
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003338005.2 → XP_003338053.2  YjeF [Puccinia graminis f. sp. tritici CRL 75-36-700-3]

      See identical proteins and their annotated locations for XP_003338053.2

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      E3LAQ9
      UniProtKB/TrEMBL
      A0A5B0P027
      Conserved Domains (1) summary
      cd01171
      Location:96 → 384
      YXKO-related; B.subtilis YXKO protein of unknown function and related proteins. Based on the conservation of the ATP binding site, the substrate binding site and the Mg2+binding site and structural homology this group is a member of the ribokinase-like superfamily.

    2. XM_003888473.1 → XP_003888522.1  YjeF, variant [Puccinia graminis f. sp. tritici CRL 75-36-700-3]

      See identical proteins and their annotated locations for XP_003888522.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A5B0P027, H6QVD8
      Conserved Domains (1) summary
      cd01171
      Location:24 → 312
      YXKO-related; B.subtilis YXKO protein of unknown function and related proteins. Based on the conservation of the ATP binding site, the substrate binding site and the Mg2+binding site and structural homology this group is a member of the ribokinase-like superfamily.
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    E3LAQ9.2

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