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    PHACADRAFT_186753 hypothetical protein [ Phanerochaete carnosa HHB-10118-sp ]

    Gene ID: 18910375, updated on 14-Dec-2023

    Summary

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    Gene symbol
    PHACADRAFT_186753
    Gene description
    hypothetical protein
    Locus tag
    PHACADRAFT_186753
    Gene type
    protein coding
    RNA name
    uncharacterized protein
    RefSeq status
    PROVISIONAL
    Organism
    Phanerochaete carnosa HHB-10118-sp (strain: HHB-10118-sp)
    Lineage
    Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Polyporales; Phanerochaetaceae; Phanerochaete
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    Genomic context

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    See PHACADRAFT_186753 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    5

    NW_006767635.1Genomic Context describing neighboring genes Neighboring gene glycoside hydrolase family 3 protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_006767635.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Comparative genomics of the white-rot fungi, Phanerochaete carnosa and P. chrysosporium, to elucidate the genetic basis of the distinct wood types they colonize. Suzuki H, et al. BMC Genomics, 2012 Sep 2. PMID 22937793, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    hypothetical protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_006767635.1 Reference assembly

      Range
      1471086..1473264 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_007398923.1 → XP_007398985.1  uncharacterized protein PHACADRAFT_186753 [Phanerochaete carnosa HHB-10118-sp]

      See identical proteins and their annotated locations for XP_007398985.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      K5W167
      Conserved Domains (2) summary
      cd06174
      Location:84 → 390
      MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
      pfam07690
      Location:84 → 451
      MFS_1; Major Facilitator Superfamily
    Protein Accession Links
    GenPept Link UniProtKB Link
    EKM52644.1

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