U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    UBTD2 ubiquitin domain containing 2 [ Pan troglodytes (chimpanzee) ]

    Gene ID: 462268, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    UBTD2provided by VGNC
    Official Full Name
    ubiquitin domain containing 2provided by VGNC
    Primary source
    VGNC:VGNC:13612
    Locus tag
    CK820_G0025761
    See related
    Ensembl:ENSPTRG00000044878
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See UBTD2 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 4 NC_072402.2 (169871233..169946876, complement)
    RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 5 NC_072403.1 (169893911..169968738, complement)

    Chromosome 4 - NC_072402.2Genomic Context describing neighboring genes Neighboring gene serine/threonine kinase 10 Neighboring gene Krueppel-like factor 3 Neighboring gene EF-hand calcium binding domain 9 Neighboring gene small nucleolar RNA SNORA57 Neighboring gene SH3 and PX domains 2B Neighboring gene uncharacterized LOC134810030

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    ubiquitin domain-containing protein 2
    Names
    dendritic cell-derived ubiquitin-like protein

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Genomic

    1. NC_072402.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

      Range
      169871233..169946876 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_016954201.4 → XP_016809690.1  ubiquitin domain-containing protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A2J8LXV1, A0A6D2Y143, K7B561
      Related
      ENSPTRP00000093917.1
      Conserved Domains (2) summary
      cd17121
      Location:151 → 225
      Ubl_UBTD2; ubiquitin-like (Ubl) domain found in ubiquitin domain-containing protein 2 (UBTD2)
      pfam16455
      Location:30 → 132
      UBD; Ubiquitin-binding domain

    2. XM_063810857.1 → XP_063666927.1  ubiquitin domain-containing protein 2 isoform X3

    3. XM_063810856.1 → XP_063666926.1  ubiquitin domain-containing protein 2 isoform X2

    4. XM_054684775.2 → XP_054540750.1  ubiquitin domain-containing protein 2 isoform X3

    5. XM_054684776.2 → XP_054540751.1  ubiquitin domain-containing protein 2 isoform X3

    6. XM_016954202.4 → XP_016809691.1  ubiquitin domain-containing protein 2 isoform X2

      Conserved Domains (2) summary
      cd17121
      Location:135 → 209
      Ubl_UBTD2; ubiquitin-like (Ubl) domain found in ubiquitin domain-containing protein 2 (UBTD2)
      pfam16455
      Location:12 → 116
      UBD; Ubiquitin-binding domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials