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    dnajc27 DnaJ (Hsp40) homolog, subfamily C, member 27 [ Oryzias latipes (Japanese medaka) ]

    Gene ID: 101174982, updated on 8-Mar-2024

    Summary

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    Gene symbol
    dnajc27
    Gene description
    DnaJ (Hsp40) homolog, subfamily C, member 27
    See related
    EnsemblRapid:ENSORLG00000001134
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryzias latipes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
    Also known as
    rbj
    Orthologs
    human zebrafish all
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    Genomic context

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    See dnajc27 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current ASM223467v1 (GCF_002234675.1) 2 NC_019860.2 (10211488..10222272, complement)
    102 previous assembly ASM31367v1 (GCF_000313675.1) 2 NC_019860.1 (12863810..12874687, complement)

    Chromosome 2 - NC_019860.2Genomic Context describing neighboring genes Neighboring gene xanthine dehydrogenase Neighboring gene adenylate cyclase type 8-like Neighboring gene T-cell surface glycoprotein CD3 zeta chain Neighboring gene cellular repressor of E1A-stimulated genes 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. RJLs: a new family of Ras-related GTP-binding proteins. Nepomuceno-Silva JL, et al. Gene, 2004 Mar 3. PMID 14980719
    2. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    dnaJ homolog subfamily C member 27
    Names
    DnaJ heat shock protein family (Hsp40) member C27

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Oryzias latipes Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM223467v1 Primary Assembly

    Genomic

    1. NC_019860.2 Reference ASM223467v1 Primary Assembly

      Range
      10211488..10222272 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004066446.4 → XP_004066494.1  dnaJ homolog subfamily C member 27

      UniProtKB/TrEMBL
      A0A3P9J6M6, H2L6F0
      Related
      ENSORLP00000047611.1, ENSORLT00000049668.1
      Conserved Domains (3) summary
      cd06257
      Location:216 → 263
      DnaJ; DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, ...
      cd04119
      Location:16 → 183
      RJL; Rab GTPase family J-like (RabJ-like)
      smart00175
      Location:16 → 176
      RAB; Rab subfamily of small GTPases
    Nucleotide Protein
    Heading Accession and Version

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