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    CG17224 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 33510, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG17224provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0031489
    Locus tag
    Dmel_CG17224
    See related
    AllianceGenome:FB:FBgn0031489
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG17224
    Summary
    Predicted to enable uridine phosphorylase activity. Predicted to be involved in uridine catabolic process. Predicted to be located in cytoplasm. Predicted to be active in cytosol. Is expressed in amnioserosa and amnioserosa anlage. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG17224 in Genome Data Viewer
    Location:
    23C4-23C4; 2-8 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (3016441..3018308, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (3016441..3018308, complement)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Ccdc85 Neighboring gene uncharacterized protein Neighboring gene alpha1,4-galactosyltransferase 1 Neighboring gene pre-mRNA processing factor 40 Neighboring gene Splicing factor 3b subunit 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Notch ligand activity is modulated by glycosphingolipid membrane composition in Drosophila melanogaster. Hamel S, et al. J Cell Biol, 2010 Feb 22. PMID 20176925, Free PMC Article
    2. Drosophila melanogaster heterochromatin protein HP1b plays important roles in transcriptional activation and development. Zhang D, et al. Chromosoma, 2011 Feb. PMID 20857302
    3. Evidence for large domains of similarly expressed genes in the Drosophila genome. Spellman PT, et al. J Biol, 2002. PMID 12144710, Free PMC Article
    4. Isolation of a natural DNA virus of Drosophila melanogaster, and characterisation of host resistance and immune responses. Palmer WH, et al. PLoS Pathog, 2018 Jun. PMID 29864164, Free PMC Article
    5. Investigating the Evolution of Drosophila STING-Dependent Antiviral Innate Immunity by Multispecies Comparison of 2'3'-cGAMP Responses. Hédelin L, et al. Mol Biol Evol, 2024 Mar 1. PMID 38377349, Free PMC Article

    See all (35) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables uridine phosphorylase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables uridine phosphorylase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in nucleoside metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in nucleotide catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in uridine catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG17224-PA
    CG17224-PB
    CG17224-PC
    CG17224-PD
    NP_001162855.1
    NP_001259977.1
    NP_608735.2
    NP_722867.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      3016441..3018308 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001169384.3 → NP_001162855.1  uncharacterized protein Dmel_CG17224, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001162855.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q0E8U4, Q8MRW0
      Conserved Domains (1) summary
      TIGR01719
      Location:10 → 300
      euk_UDPppase; uridine phosphorylase

    2. NM_164520.4 → NP_722867.1  uncharacterized protein Dmel_CG17224, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_722867.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q0E8U4, Q8MRW0
      Related
      FBpp0077355
      Conserved Domains (1) summary
      TIGR01719
      Location:10 → 300
      euk_UDPppase; uridine phosphorylase

    3. NM_134891.4 → NP_608735.2  uncharacterized protein Dmel_CG17224, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_608735.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q0E8U4, Q8MRW0
      Related
      FBpp0077356
      Conserved Domains (1) summary
      TIGR01719
      Location:10 → 300
      euk_UDPppase; uridine phosphorylase

    4. NM_001273048.1 → NP_001259977.1  uncharacterized protein Dmel_CG17224, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001259977.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q0E8U4, Q8MRW0
      Conserved Domains (1) summary
      TIGR01719
      Location:10 → 300
      euk_UDPppase; uridine phosphorylase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q0E8U4 Q0E8U4
    Q8MRW0 Q8MRW0

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