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    CG13933 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 38227, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG13933provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0035270
    Locus tag
    Dmel_CG13933
    See related
    AllianceGenome:FB:FBgn0035270
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    dmASBa; Dmel\CG13933
    Summary
    Predicted to be involved in intracellular signal transduction. Is expressed in organism and pole plasm. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG13933 in Genome Data Viewer
    Location:
    62B3-62B4; 3-1.0 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (1771809..1775147, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (1771809..1775147, complement)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Chitinase 2 Neighboring gene uncharacterized protein Neighboring gene Dynein heavy chain at 62B Neighboring gene antisense RNA:CR44351 Neighboring gene DNA polymerase delta subunit 2 Neighboring gene uncharacterized protein Neighboring gene mitochondrial ribosomal protein L46

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Wg/Wnt1 and Erasp link ER stress to proapoptotic signaling in an autosomal dominant retinitis pigmentosa model. Park JE, et al. Exp Mol Med, 2023 Jul. PMID 37464094, Free PMC Article
    2. Genetic Basis of Increased Lifespan and Postponed Senescence in Drosophila melanogaster. Parker GA, et al. G3 (Bethesda), 2020 Mar 5. PMID 31969430, Free PMC Article
    3. The SOCS box: a tale of destruction and degradation. Kile BT, et al. Trends Biochem Sci, 2002 May. PMID 12076535
    4. In vivo proximity biotin ligation identifies the interactome of Egalitarian, a Dynein cargo adaptor. Baker FC, et al. Development, 2021 Nov 15. PMID 35020877, Free PMC Article
    5. Identification of genes that promote or inhibit olfactory memory formation in Drosophila. Walkinshaw E, et al. Genetics, 2015 Apr. PMID 25644700, Free PMC Article

    See all (23) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    involved_in intracellular signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG13933-PA
    CG13933-PB

    NCBI Reference Sequences (RefSeq)

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    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      1771809..1775147 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001274356.1 → NP_001261285.1  uncharacterized protein Dmel_CG13933, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001261285.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9PDX4
      Conserved Domains (4) summary
      cd00204
      Location:65 → 218
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam07525
      Location:629 → 666
      SOCS_box; SOCS box
      pfam12796
      Location:169 → 254
      Ank_2; Ankyrin repeats (3 copies)
      sd00045
      Location:234 → 260
      ANK; ANK repeat [structural motif]

    2. NM_139401.2 → NP_647658.1  uncharacterized protein Dmel_CG13933, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_647658.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9W089
      Related
      FBpp0072675
      Conserved Domains (4) summary
      cd00204
      Location:65 → 218
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam07525
      Location:630 → 667
      SOCS_box; SOCS box
      pfam12796
      Location:169 → 254
      Ank_2; Ankyrin repeats (3 copies)
      sd00045
      Location:234 → 260
      ANK; ANK repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    M9PDX4 M9PDX4
    Q9W089 Q9W089

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