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    yhaV type II toxin-antitoxin system ribonuclease toxin YhaV [ Shigella boydii ]

    Gene ID: 75203754, updated on 3-Dec-2024

    Summary

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    Gene symbol
    yhaV
    Gene description
    type II toxin-antitoxin system ribonuclease toxin YhaV
    Locus tag
    CEH00_RS09765
    Gene type
    protein coding
    Organism
    Shigella boydii (strain: ESBL-W3-2, nat-host: Homo sapiens)
    Lineage
    Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella
    Old locus tag
    CEH00_09820
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    Genomic context

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    NZ_NIYS01000068.1Genomic Context describing neighboring genes Neighboring gene tagatose-bisphosphate aldolase subunit KbaZ Neighboring gene aga operon transcriptional regulator AgaR Neighboring gene type II toxin-antitoxin system antitoxin PrlF Neighboring gene galactarate dehydratase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_NIYS01000068.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. mRNA interferases, sequence-specific endoribonucleases from the toxin-antitoxin systems. Yamaguchi Y, et al. Prog Mol Biol Transl Sci, 2009. PMID 19215780
    2. prlF and yhaV encode a new toxin-antitoxin system in Escherichia coli. Schmidt O, et al. J Mol Biol, 2007 Sep 28. PMID 17706670, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    type II toxin-antitoxin system ribonuclease toxin YhaV
    WP_000347267.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_NIYS01000068.1 Reference assembly

      Range
      11856..12320 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_000347267.1 MULTISPECIES: type II toxin-antitoxin system ribonuclease toxin YhaV [Enterobacteriaceae]

      See identical proteins and their annotated locations for WP_000347267.1

      UniProtKB/TrEMBL
      A0A066RMZ6, A0A0E0XTR4, A0A7U9NYP8, A0A9P2IEI7, A0A9Q5U350, A0AAD2U728, A0AAD2V701, A0AAN3MJ12, A0AAN4AH69, A7ZS24, B7LH64, E0J2W4, W1F3C5
      Conserved Domains (1) summary
      pfam11663
      Location:12 → 151
      Toxin_YhaV; Toxin with endonuclease activity, of toxin-antitoxin system
    Nucleotide Protein
    Heading Accession and Version