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    F0316_RS07670 amino acid aminotransferase [ Vibrio cholerae ]

    Gene ID: 69720026, updated on 17-Dec-2024

    Summary

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    Gene symbol
    F0316_RS07670
    Gene description
    amino acid aminotransferase
    Locus tag
    F0316_RS07670
    Gene type
    protein coding
    Organism
    Vibrio cholerae (strain: RFB16)
    Lineage
    Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio
    Old locus tag
    F0316_07670
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    Genomic context

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    Location:
    chromosome: 1

    1 - NZ_CP043554.1Genomic Context describing neighboring genes Neighboring gene bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase Neighboring gene HD-GYP domain-containing protein Neighboring gene cyclic nucleotide-binding/CBS domain-containing protein Neighboring gene 3'-5' exonuclease

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP043554.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Origins of the current seventh cholera pandemic. Hu D, et al. Proc Natl Acad Sci U S A, 2016 Nov 29. PMID 27849586, Free PMC Article
    2. Evolutionary relationships among pyridoxal-5'-phosphate-dependent enzymes. Regio-specific alpha, beta and gamma families. Alexander FW, et al. Eur J Biochem, 1994 Feb 1. PMID 8112347
    3. The cloning and sequence analysis of the aspC and tyrB genes from Escherichia coli K12. Comparison of the primary structures of the aspartate aminotransferase and aromatic aminotransferase of E. coli with those of the pig aspartate aminotransferase isoenzymes. Fotheringham IG, et al. Biochem J, 1986 Mar 15. PMID 3521591, Free PMC Article
    4. The molecular evolution of pyridoxal-5'-phosphate-dependent enzymes. Mehta PK, et al. Adv Enzymol Relat Areas Mol Biol, 2000. PMID 10800595

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    amino acid aminotransferase
    WP_000462147.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP043554.1 Reference assembly

      Range
      1655252..1656442
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_000462147.1 MULTISPECIES: amino acid aminotransferase [Vibrio]

      See identical proteins and their annotated locations for WP_000462147.1

      UniProtKB/TrEMBL
      A0A086SR85, A0A0K9UY20
      Conserved Domains (1) summary
      PRK09257
      Location:1 → 396
      PRK09257; aromatic amino acid transaminase
    Nucleotide Protein
    Heading Accession and Version