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    F0316_RS00630 bifunctional GNAT family N-acetyltransferase/hotdog fold thioesterase [ Vibrio cholerae ]

    Gene ID: 69718666, updated on 30-Nov-2024

    Summary

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    Gene symbol
    F0316_RS00630
    Gene description
    bifunctional GNAT family N-acetyltransferase/hotdog fold thioesterase
    Locus tag
    F0316_RS00630
    Gene type
    protein coding
    Organism
    Vibrio cholerae (strain: RFB16)
    Lineage
    Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio
    Old locus tag
    F0316_00630
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    Genomic context

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    Location:
    chromosome: 1

    1 - NZ_CP043554.1Genomic Context describing neighboring genes Neighboring gene AAA family ATPase Neighboring gene virulence factor BrkB family protein Neighboring gene D-aminoacyl-tRNA deacylase Neighboring gene AsmA family protein Neighboring gene phosphoenolpyruvate carboxykinase (ATP)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP043554.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Phylodynamic analysis of clinical and environmental Vibrio cholerae isolates from Haiti reveals diversification driven by positive selection. Azarian T, et al. mBio, 2014 Dec 23. PMID 25538191, Free PMC Article
    2. The Hotdog fold: wrapping up a superfamily of thioesterases and dehydratases. Dillon SC, et al. BMC Bioinformatics, 2004 Aug 12. PMID 15307895, Free PMC Article
    3. GCN5-related N-acetyltransferases: a structural overview. Dyda F, et al. Annu Rev Biophys Biomol Struct, 2000. PMID 10940244, Free PMC Article
    4. GCN5-related histone N-acetyltransferases belong to a diverse superfamily that includes the yeast SPT10 protein. Neuwald AF, et al. Trends Biochem Sci, 1997 May. PMID 9175471

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    bifunctional GNAT family N-acetyltransferase/hotdog fold thioesterase
    WP_000475471.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP043554.1 Reference assembly

      Range
      120311..121237
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_000475471.1 MULTISPECIES: bifunctional GNAT family N-acetyltransferase/hotdog fold thioesterase [Vibrio]

      See identical proteins and their annotated locations for WP_000475471.1

      UniProtKB/TrEMBL
      A0A0E3W4A6, A0A0K9UNJ3
      Conserved Domains (2) summary
      pfam00583
      Location:13 → 122
      Acetyltransf_1; Acetyltransferase (GNAT) family
      pfam09500
      Location:157 → 297
      YiiD_C; Putative thioesterase (yiiD_Cterm)
    Nucleotide Protein
    Heading Accession and Version