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    ychF redox-regulated ATPase YchF [ Shigella dysenteriae ]

    Gene ID: 75171314, updated on 3-Dec-2024

    Summary

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    Gene symbol
    ychF
    Gene description
    redox-regulated ATPase YchF
    Locus tag
    HUZ68_RS09970
    Gene type
    protein coding
    Organism
    Shigella dysenteriae (strain: SWHEFF_49)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella
    Old locus tag
    HUZ68_09880
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    Genomic context

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    NZ_CP055055.1Genomic Context describing neighboring genes Neighboring gene dihydroxyacetone kinase operon transcriptional regulator DhaR Neighboring gene autotransporter outer membrane beta-barrel domain-containing protein Neighboring gene aminoacyl-tRNA hydrolase Neighboring gene stress-induced protein YchH

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP055055.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The 70S ribosome modulates the ATPase activity of Escherichia coli YchF. Becker M, et al. RNA Biol, 2012 Oct. PMID 22995830, Free PMC Article
    2. Histidine 114 Is Critical for ATP Hydrolysis by the Universally Conserved ATPase YchF. Rosler KS, et al. J Biol Chem, 2015 Jul 24. PMID 26018081, Free PMC Article
    3. Crystal structure of the YchF protein reveals binding sites for GTP and nucleic acid. Teplyakov A, et al. J Bacteriol, 2003 Jul. PMID 12837776, Free PMC Article
    4. Redox Activation of the Universally Conserved ATPase YchF by Thioredoxin 1. Hannemann L, et al. Antioxid Redox Signal, 2016 Jan 20. PMID 26160547, Free PMC Article
    5. Comparative genomics of prokaryotic GTP-binding proteins (the Era, Obg, EngA, ThdF (TrmE), YchF and YihA families) and their relationship to eukaryotic GTP-binding proteins (the DRG, ARF, RAB, RAN, RAS and RHO families). Mittenhuber G. J Mol Microbiol Biotechnol, 2001 Jan. PMID 11200227

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    redox-regulated ATPase YchF

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP055055.1 Reference assembly

      Range
      2077461..2078552 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_000505866.1 MULTISPECIES: redox-regulated ATPase YchF [Enterobacteriaceae]

      See identical proteins and their annotated locations for WP_000505866.1

      UniProtKB/Swiss-Prot
      P0ABU2, P0ABU3, P0ABU4, P31216, P76018
      UniProtKB/TrEMBL
      A0A090NHY6, A0A0E0Y044, A0A0H3MGD6, A0A0H3PP42, A0A0J3W0W5, A0A1S9KG23, A0A1W2M8P8, A0A1X3J0W3, A0A1X3JJ52, A0A236MNU7, A0A237MKK2, A0A398QCC1, A0A4P7TMJ7, A0A4P8C5T2, A0A5F1FDU1, A0A5F1I5L0, A0A6H2GF57, A0A6N3QRH0, A0A6N3QZV3, A0A7I6H4Y7, A0A7U9J090, A0A7U9QHA5, A0A7W4KP11, A0A7Z8GKX2, A0A822PF82, A0A829KYG4, A0A836NF88, A0A8E0KTM3, A0A979GE77, A0A9P2GLA9, A0A9P2MLR1, A0A9Q6Y0S2, A0AA35AD24, A0AAD2UCA8, A0AAD2VB31, A0AAD2ZDJ4, A0AAN1AGY5, A0AAN1S436, A0AAN4ACY9, A0AAP9MJK9, A0AAV3HEN9, A7ZKX6, B1LH97, B2TZV1, B7LGW3, B7N414, C3TD32, D2ADJ2, D3H2I7, E0IV57, E2XIB3, F5NTE8, I6CXA0, I6EFX4, Q0T5J2, Q31ZP6, Q32H04, W1F8B9, W1WS04
      Conserved Domains (1) summary
      PRK09601
      Location:1 → 363
      PRK09601; redox-regulated ATPase YchF
    Nucleotide Protein
    Heading Accession and Version

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