U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    A1122_RS14840 type II secretion system protein GspD [ Yersinia pestis A1122 ]

    Gene ID: 57976389, updated on 10-Oct-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    A1122_RS14840
    Gene description
    type II secretion system protein GspD
    Locus tag
    A1122_RS14840
    Gene type
    protein coding
    Organism
    Yersinia pestis A1122 (strain: A1122)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Yersinia
    Old locus tag
    A1122_14740
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Sequence:
    NC_017168.1 (3200378..3201622, complement)

    NC_017168.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene zonular occludens toxin domain-containing protein Neighboring gene DUF2523 domain-containing protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_017168.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Thirty-Two Complete Genome Assemblies of Nine Yersinia Species, Including Y. pestis, Y. pseudotuberculosis, and Y. enterocolitica. Johnson SL, et al. Genome Announc, 2015 Apr 30. PMID 25931590, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    type II secretion system protein GspD

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_017168.1 Reference assembly

      Range
      3200378..3201622 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_000722136.1 MULTISPECIES: type II secretion system protein GspD [Enterobacterales]

      See identical proteins and their annotated locations for WP_000722136.1

      UniProtKB/TrEMBL
      A0A3U1SVU6, A0A3V7X841, A0A5X7D897, A0A5X8YI95, A0A600YPK2, A0A6X8QSP8, A0A715LDF4, A0A8E6UAY3, A0A8I0Q123, A0AAN4F1U7, A0AAP0Z401, Q0WEP1, Q1RBR1
      Conserved Domains (1) summary
      COG1450
      Location:1 → 414
      PulD; Type II secretory pathway component GspD/PulD (secretin) [Intracellular trafficking, secretion, and vesicular transport]
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.