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    DCDC1 doublecortin domain containing 1 [ Chelonia mydas (Green sea turtle) ]

    Gene ID: 102936154, updated on 10-Mar-2024

    Summary

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    Gene symbol
    DCDC1
    Gene description
    doublecortin domain containing 1
    Locus tag
    UY3_14747
    See related
    EnsemblRapid:ENSCMYG00015009838
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Chelonia mydas
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
    Also known as
    DCDC5
    Orthologs
    human mouse all
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    Genomic context

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    See DCDC1 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    38
    Annotation release Status Assembly Chr Location
    103 current rCheMyd1.pri.v2 (GCF_015237465.2) 6 NC_051246.2 (43741359..44110643)
    102 previous assembly rCheMyd1.pri (GCF_015237465.1) 5 NC_051245.1 (43741301..44102986)

    Chromosome 6 - NC_051246.2Genomic Context describing neighboring genes Neighboring gene elongator acetyltransferase complex subunit 4 Neighboring gene inner mitochondrial membrane peptidase subunit 1 Neighboring gene DnaJ heat shock protein family (Hsp40) member C24 Neighboring gene uncharacterized LOC122466397 Neighboring gene metallophosphoesterase domain containing 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables microtubule binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intracellular signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of mitotic cytokinesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    doublecortin domain-containing protein 1
    Names
    Doublecortin domain-containing protein 1
    Doublecortin domain-containing protein 5
    doublecortin domain containing 5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference rCheMyd1.pri.v2 Primary Assembly

    Genomic

    1. NC_051246.2 Reference rCheMyd1.pri.v2 Primary Assembly

      Range
      43741359..44110643
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_043549349.1 → XP_043405284.1  doublecortin domain-containing protein 1

      Related
      ENSCMYP00015015209.1, ENSCMYT00015018434.1
      Conserved Domains (6) summary
      cd00161
      Location:1094 → 1209
      RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
      cd17155
      Location:92 → 163
      DCX_DCDC1; Doublecortin-like domain found in doublecortin domain-containing protein 1 (DCDC1)
      cd17156
      Location:822 → 936
      DCX1_DCDC5; Doublecortin-like domain 1 found in doublecortin domain-containing protein 5 (DCDC5)
      cd17157
      Location:214 → 298
      DCX2_DCDC5; Doublecortin-like domain 2 found in doublecortin domain-containing protein 5 (DCDC5)
      cd17158
      Location:1340 → 1481
      DCX3_DCDC5; Doublecortin-like domain 3 found in doublecortin domain-containing protein 5 (DCDC5)
      cd17159
      Location:1599 → 1671
      DCX4_DCDC5; Doublecortin-like domain 4 found in doublecortin domain-containing protein 5 (DCDC5)
    Nucleotide Protein
    Heading Accession and Version

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