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    TNFRSF11B TNF receptor superfamily member 11b [ Chelonia mydas (Green sea turtle) ]

    Gene ID: 102939155, updated on 10-Mar-2024

    Summary

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    Gene symbol
    TNFRSF11B
    Gene description
    TNF receptor superfamily member 11b
    Locus tag
    UY3_13159
    See related
    EnsemblRapid:ENSCMYG00015005653
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Chelonia mydas
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
    Orthologs
    human mouse all
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    Genomic context

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    See TNFRSF11B in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current rCheMyd1.pri.v2 (GCF_015237465.2) 2 NC_057850.1 (25042092..25134214)
    102 previous assembly rCheMyd1.pri (GCF_015237465.1) 2 NC_051242.1 (25099035..25133717)

    Chromosome 2 - NC_057850.1Genomic Context describing neighboring genes Neighboring gene cellular communication network factor 3 Neighboring gene mal, T cell differentiation protein 2 Neighboring gene collectin subfamily member 10 Neighboring gene uncharacterized LOC122464402 Neighboring gene sterile alpha motif domain containing 12

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tumor necrosis factor receptor superfamily member 11B
    Names
    Tumor necrosis factor receptor superfamily member 11B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference rCheMyd1.pri.v2 Primary Assembly

    Genomic

    1. NC_057850.1 Reference rCheMyd1.pri.v2 Primary Assembly

      Range
      25042092..25134214
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_043539152.1 → XP_043395087.1  tumor necrosis factor receptor superfamily member 11B isoform X3

      UniProtKB/TrEMBL
      M7AW43
      Related
      ENSCMYP00015008652.1, ENSCMYT00015010540.1
      Conserved Domains (2) summary
      cd00185
      Location:117 → 189
      TNFRSF; Tumor necrosis factor receptor superfamily (TNFRSF)
      cd10581
      Location:4 → 145
      TNFRSF11B; Tumor necrosis factor receptor superfamily member 11B (TNFRSF11B), also known as Osteoprotegerin (OPG)

    2. XM_027828573.3 → XP_027684374.2  tumor necrosis factor receptor superfamily member 11B isoform X2

      UniProtKB/TrEMBL
      M7AW43
      Conserved Domains (2) summary
      cd00185
      Location:154 → 226
      TNFRSF; Tumor necrosis factor receptor superfamily (TNFRSF)
      cd10581
      Location:36 → 182
      TNFRSF11B; Tumor necrosis factor receptor superfamily member 11B (TNFRSF11B), also known as Osteoprotegerin (OPG)

    3. XM_007066263.4 → XP_007066325.3  tumor necrosis factor receptor superfamily member 11B isoform X1

      UniProtKB/TrEMBL
      M7AW43
      Related
      ENSCMYP00015008648.1, ENSCMYT00015010536.1
      Conserved Domains (2) summary
      cd00185
      Location:173 → 245
      TNFRSF; Tumor necrosis factor receptor superfamily (TNFRSF)
      cd10581
      Location:55 → 201
      TNFRSF11B; Tumor necrosis factor receptor superfamily member 11B (TNFRSF11B), also known as Osteoprotegerin (OPG)
    Nucleotide Protein
    Heading Accession and Version

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