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    Or5m5 olfactory receptor family 5 subfamily M member 5 [ Mus musculus (house mouse) ]

    Gene ID: 258581, updated on 9-Dec-2024

    Summary

    Official Symbol
    Or5m5provided by MGI
    Official Full Name
    olfactory receptor family 5 subfamily M member 5provided by MGI
    Primary source
    MGI:MGI:3030864
    See related
    Ensembl:ENSMUSG00000044923 AllianceGenome:MGI:3030864
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    MOR196-2; Olfr1030
    Summary
    Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. [provided by RefSeq, Jul 2008]
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See Or5m5 in Genome Data Viewer
    Location:
    2 D; 2 49.69 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (85809656..85815142)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (85979312..85984798)

    Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_05019 Neighboring gene predicted gene, 52520 Neighboring gene olfactory receptor family 5 subfamily M member 11B Neighboring gene olfactory receptor family 5 subfamily M member 8 Neighboring gene olfactory receptor family 5 subfamily M member 3

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Pathways from PubChem

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables G protein-coupled receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables odorant binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables olfactory receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables olfactory receptor activity ISA
    Inferred from Sequence Alignment
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in membrane ISA
    Inferred from Sequence Alignment
    more info
    PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    olfactory receptor 5M5
    Names
    GA_x6K02T2Q125-47462755-47463693
    olfactory receptor 1030
    olfactory receptor 196-2
    olfactory receptor MOR196-2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_146588.2NP_666799.1  olfactory receptor 5M5

      See identical proteins and their annotated locations for NP_666799.1

      Status: VALIDATED

      Source sequence(s)
      AL928839
      Consensus CDS
      CCDS16231.1
      UniProtKB/Swiss-Prot
      Q8VFL5
      UniProtKB/TrEMBL
      A0PK66
      Related
      ENSMUSP00000053309.2, ENSMUST00000056849.3
      Conserved Domains (1) summary
      cd15412
      Location:31309
      7tmA_OR5M-like; olfactory receptor subfamily 5M and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000068.8 Reference GRCm39 C57BL/6J

      Range
      85809656..85815142
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)