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    prlF type II toxin-antitoxin system antitoxin PrlF [ Shigella boydii ]

    Gene ID: 75203755, updated on 3-Dec-2024

    Summary

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    Gene symbol
    prlF
    Gene description
    type II toxin-antitoxin system antitoxin PrlF
    Locus tag
    CEH00_RS09770
    Gene type
    protein coding
    RefSeq status
    PIPELINE
    Organism
    Shigella boydii (strain: ESBL-W3-2, nat-host: Homo sapiens)
    Lineage
    Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella
    Old locus tag
    CEH00_09825
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    Genomic context

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    NZ_NIYS01000068.1Genomic Context describing neighboring genes Neighboring gene aga operon transcriptional regulator AgaR Neighboring gene type II toxin-antitoxin system ribonuclease toxin YhaV Neighboring gene galactarate dehydratase Neighboring gene galactarate/glucarate/glycerate transporter GarP

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_NIYS01000068.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. mRNA interferases, sequence-specific endoribonucleases from the toxin-antitoxin systems. Yamaguchi Y, et al. Prog Mol Biol Transl Sci, 2009. PMID 19215780
    2. Increased expression of the bifunctional protein PrlF suppresses overproduction lethality associated with exported beta-galactosidase hybrid proteins in Escherichia coli. Kiino DR, et al. J Bacteriol, 1990 Jan. PMID 2152898, Free PMC Article
    3. prlF and yhaV encode a new toxin-antitoxin system in Escherichia coli. Schmidt O, et al. J Mol Biol, 2007 Sep 28. PMID 17706670, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    type II toxin-antitoxin system antitoxin PrlF

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_NIYS01000068.1 Reference assembly

      Range
      12320..12655 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_001307405.1 MULTISPECIES: type II toxin-antitoxin system antitoxin PrlF [Enterobacteriaceae]

      See identical proteins and their annotated locations for WP_001307405.1

      Status: PIPELINE

      UniProtKB/Swiss-Prot
      P15373, Q2M980
      UniProtKB/TrEMBL
      A0A0E0XVC7, A0A0J3VQZ0, A0A1X3JC70, A0A236BHC7, A0A236M398, A0A2A2XSV8, A0A398QTV2, A0A657ESI8, A0A6H2GMC6, A0A7I6H9J0, A0A7U9NYI7, A0A7Z1EHW8, A0A829KZN3, A0A836ND99, A0A979GHM5, A0A9P2IDC0, A0AA35F792, A0AAD2U760, A0AAD2V653, A0AAD2VEI2, A0AAN1VM93, A0AAN3MDW4, A0AAN3V8R5, A0AAN4SWT4, A0AAP9MS68, A7ZS23, B7LH65, D3GWU4, E0J2W5, J7Q9V7, W1F4X2, W1WLY7
      Conserved Domains (1) summary
      PRK09974
      Location:4 → 111
      PRK09974; type II toxin-antitoxin system PrlF family antitoxin
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P15373.1

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