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    prdR sigma-54 dependent transcriptional regulator PrdR [ Clostridioides difficile ]

    Gene ID: 66355664, updated on 15-Dec-2024

    Summary

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    Gene symbol
    prdR
    Gene description
    sigma-54 dependent transcriptional regulator PrdR
    Locus tag
    KNZ77_RS16130
    Gene type
    protein coding
    RefSeq status
    PIPELINE
    Organism
    Clostridioides difficile (strain: S-0253, nat-host: Homo sapiens)
    Lineage
    Bacteria; Bacillati; Bacillota; Clostridia; Peptostreptococcales; Peptostreptococcaceae; Clostridioides
    Old locus tag
    KNZ77_16130
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    Genomic context

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    NZ_CP076401.1Genomic Context describing neighboring genes Neighboring gene CBO2463/CBO2479 domain-containing protein Neighboring gene D-proline reductase (dithiol) proprotein PrdA Neighboring gene thioester domain-containing protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP076401.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Complete genome sequence of Peptoclostridium difficile strain Z31. Pereira FL, et al. Gut Pathog, 2016. PMID 28828039, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    sigma-54 dependent transcriptional regulator PrdR

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP076401.1 Reference assembly

      Range
      3590562..3592322 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_003428097.1 sigma-54 dependent transcriptional regulator PrdR [Clostridioides difficile]

      See identical proteins and their annotated locations for WP_003428097.1

      Status: PIPELINE

      UniProtKB/TrEMBL
      A0A031WJX2, A0A0H3NFQ0, A0A9R0BN91, Q17ZY8
      Conserved Domains (2) summary
      COG3829
      Location:74 → 582
      RocR; Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding Fis domains [Transcription, Signal transduction mechanisms]
      cd02205
      Location:15 → 124
      CBS_pair_SF; Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains superfamily
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    CAJ70142.1

    Gene LinkOut

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