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    BN5_RS21770 AraC family transcriptional regulator [ Ectopseudomonas oleovorans CECT 5344 ]

    Gene ID: 61802028, updated on 3-Dec-2024

    Summary

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    Gene symbol
    BN5_RS21770
    Gene description
    AraC family transcriptional regulator
    Locus tag
    BN5_RS21770
    Gene type
    protein coding
    Organism
    Ectopseudomonas oleovorans CECT 5344 (strain: CECT5344)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Ectopseudomonas
    Old locus tag
    BN5_4451
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    Genomic context

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    Location:
    chromosome: I

    I - NZ_HG916826.1Genomic Context describing neighboring genes Neighboring gene YkgB family protein Neighboring gene AraC family transcriptional regulator Neighboring gene carboxymuconolactone decarboxylase family protein Neighboring gene cytochrome P460 family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_HG916826.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Phylogeny, function, and evolution of the cupins, a structurally conserved, functionally diverse superfamily of proteins. Khuri S, et al. Mol Biol Evol, 2001 Apr. PMID 11264412
    2. The XylS/AraC family of regulators. Gallegos MT, et al. Nucleic Acids Res, 1993 Feb 25. PMID 8451183, Free PMC Article
    3. The DNA-binding domain as a functional indicator: the case of the AraC/XylS family of transcription factors. Ibarra JA, et al. Genetica, 2008 May. PMID 17712603

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    AraC family transcriptional regulator

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_HG916826.1 Reference assembly

      Range
      4628371..4629213 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_003464996.1 MULTISPECIES: AraC family transcriptional regulator [Pseudomonadota]

      See identical proteins and their annotated locations for WP_003464996.1

      UniProtKB/TrEMBL
      A0A0D9A1Q7, A0A1E5X9E7, A0A1N7ERX1, A0A2K4K8X4, A0A2T0HJ25, A0A2Z4RE60, A0A7S9LM73, A0A7W2R0U7, A0A9Q5B2Y2, A0AAW7HDK0, W6R1N7
      Conserved Domains (2) summary
      COG2207
      Location:168 → 272
      AraC; AraC-type DNA-binding domain and AraC-containing proteins [Transcription]
      pfam12852
      Location:3 → 146
      Cupin_6
    Nucleotide Protein
    Heading Accession and Version

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