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    dpaA peptidoglycan meso-diaminopimelic acid protein amidase [ Cronobacter sakazakii ]

    Gene ID: 56731810, updated on 30-Mar-2024

    Summary

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    Gene symbol
    dpaA
    Gene description
    peptidoglycan meso-diaminopimelic acid protein amidase
    Locus tag
    CsakCS931_RS11950
    Gene type
    protein coding
    Organism
    Cronobacter sakazakii (strain: CS-931, nat-host: Homo sapiens)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Cronobacter
    Old locus tag
    CsakCS931_01745
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    Genomic context

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    NZ_CP027107.1Genomic Context describing neighboring genes Neighboring gene cytosol nonspecific dipeptidase Neighboring gene DNA polymerase IV Neighboring gene class II glutamine amidotransferase Neighboring gene D-sedoheptulose 7-phosphate isomerase Neighboring gene acyl-CoA dehydrogenase FadE

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP027107.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Cleavage of Braun's lipoprotein Lpp from the bacterial peptidoglycan by a paralog of l,d-transpeptidases, LdtF. Bahadur R, et al. Proc Natl Acad Sci U S A, 2021 May 11. PMID 33941679, Free PMC Article
    2. DpaA Detaches Braun's Lipoprotein from Peptidoglycan. Winkle M, et al. mBio, 2021 May 4. PMID 33947763, Free PMC Article
    3. Fully Closed Genome Sequences of Five Type Strains of the Genus Cronobacter and One Cronobacter sakazakii Strain. Moine D, et al. Genome Announc, 2016 Mar 24. PMID 27013041, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    peptidoglycan meso-diaminopimelic acid protein amidase

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP027107.1 Reference assembly

      Range
      2498974..2499711
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_004385352.1 MULTISPECIES: peptidoglycan meso-diaminopimelic acid protein amidase [Cronobacter]

      See identical proteins and their annotated locations for WP_004385352.1

      UniProtKB/TrEMBL
      A0A2S9UJ23, A7MI41
      Conserved Domains (1) summary
      COG3034
      Location:1 → 245
      YafK; Murein L,D-transpeptidase YafK [Cell wall/membrane/envelope biogenesis]
    Nucleotide Protein
    Heading Accession and Version