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    rpsM 30S ribosomal protein S13 [ Dorea formicigenerans ]

    Gene ID: 92863188, updated on 27-Aug-2024

    Summary

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    Gene symbol
    rpsM
    Gene description
    30S ribosomal protein S13
    Locus tag
    NQ560_RS01910
    Gene type
    protein coding
    Organism
    Dorea formicigenerans (strain: ATCC 27755, nat-host: Homo sapiens, culture-collection: ATCC:27755, type-material: type strain of Eubacterium formicigenerans)
    Lineage
    Bacteria; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Dorea
    Old locus tag
    NQ560_01910
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    Genomic context

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    NZ_CP102279.1Genomic Context describing neighboring genes Neighboring gene translation initiation factor IF-1 Neighboring gene 50S ribosomal protein L36 Neighboring gene 30S ribosomal protein S11 Neighboring gene 30S ribosomal protein S4

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP102279.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Multiple effects of S13 in modulating the strength of intersubunit interactions in the ribosome during translation. Cukras AR, et al. J Mol Biol, 2005 May 27. PMID 15876367, Free PMC Article
    2. Ribosomal proteins S12 and S13 function as control elements for translocation of the mRNA:tRNA complex. Cukras AR, et al. Mol Cell, 2003 Aug. PMID 14536072
    3. Assembly of the 30S ribosomal subunit: positioning ribosomal protein S13 in the S7 assembly branch. Grondek JF, et al. RNA, 2004 Dec. PMID 15525707, Free PMC Article
    4. Design, construction, and in vivo augmentation of a complex gut microbiome. Cheng AG, et al. Cell, 2022 Sep 15. PMID 36070752, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    30S ribosomal protein S13

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP102279.1 Reference assembly

      Range
      354514..354882
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_005339006.1 MULTISPECIES: 30S ribosomal protein S13 [Dorea]

      See identical proteins and their annotated locations for WP_005339006.1

      UniProtKB/TrEMBL
      A0A1C5PE09, A0A3E4L8P1
    Nucleotide Protein
    Heading Accession and Version