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    VP_RS10115 ABC transporter substrate-binding protein [ Vibrio parahaemolyticus RIMD 2210633 ]

    Gene ID: 1189591, updated on 6-Oct-2023

    Summary

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    Gene symbol
    VP_RS10115
    Gene description
    ABC transporter substrate-binding protein
    Locus tag
    VP_RS10115
    Gene type
    protein coding
    Organism
    Vibrio parahaemolyticus RIMD 2210633 (strain: RIMD 2210633, substrain: RIMD 2210633)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio
    Old locus tag
    VP2080
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    Genomic context

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    Location:
    chromosome: 1
    Sequence:
    Chromosome: 1; NC_004603.1 (2186322..2187287, complement)

    Chromosome 1 - NC_004603.1Genomic Context describing neighboring genes Neighboring gene maltodextrin glucosidase Neighboring gene ABC transporter ATP-binding protein Neighboring gene ABC transporter permease Neighboring gene terminus macrodomain insulation protein YfbV Neighboring gene acetate kinase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_004603.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Uptake or extrusion: crystal structures of full ABC transporters suggest a common mechanism. Dawson RJ, et al. Mol Microbiol, 2007 Jul. PMID 17578454
    2. A filamentous phage associated with recent pandemic Vibrio parahaemolyticus O3:K6 strains. Nasu H, et al. J Clin Microbiol, 2000 Jun. PMID 10834969, Free PMC Article
    3. Genome sequence of Vibrio parahaemolyticus: a pathogenic mechanism distinct from that of V cholerae. Makino K, et al. Lancet, 2003 Mar 1. PMID 12620739
    4. Structural, functional, and evolutionary relationships among extracellular solute-binding receptors of bacteria. Tam R, et al. Microbiol Rev, 1993 Jun. PMID 8336670, Free PMC Article
    5. The substrate-binding protein in bacterial ABC transporters: dissecting roles in the evolution of substrate specificity. Maqbool A, et al. Biochem Soc Trans, 2015 Oct. PMID 26517916

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    ABC transporter substrate-binding protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004603.1 Reference assembly

      Range
      2186322..2187287 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_005461481.1 MULTISPECIES: ABC transporter substrate-binding protein [Vibrio]

      See identical proteins and their annotated locations for WP_005461481.1

      UniProtKB/TrEMBL
      A0A072GA81, Q87MZ6
      Conserved Domains (1) summary
      COG2984
      Location:5 → 319
      COG2984; ABC-type uncharacterized transport system, periplasmic component [General function prediction only]
    Nucleotide Protein
    Heading Accession and Version

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