U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    tssE type VI secretion system baseplate subunit TssE [ Vibrio parahaemolyticus RIMD 2210633 ]

    Gene ID: 1191726, updated on 31-Jan-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    tssE
    Gene description
    type VI secretion system baseplate subunit TssE
    Locus tag
    VP_RS20120
    Gene type
    protein coding
    Organism
    Vibrio parahaemolyticus RIMD 2210633 (strain: RIMD 2210633, substrain: RIMD 2210633)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio
    Old locus tag
    VPA1031
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 2
    Sequence:
    Chromosome: 2; NC_004605.1 (1087589..1088053, complement)

    Chromosome 2 - NC_004605.1Genomic Context describing neighboring genes Neighboring gene type VI secretion system ATPase TssH Neighboring gene type VI secretion system baseplate subunit TssG Neighboring gene type VI secretion system baseplate subunit TssF Neighboring gene type VI secretion system accessory protein TagJ Neighboring gene type VI secretion system contractile sheath large subunit

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_004605.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A filamentous phage associated with recent pandemic Vibrio parahaemolyticus O3:K6 strains. Nasu H, et al. J Clin Microbiol, 2000 Jun. PMID 10834969, Free PMC Article
    2. Genome sequence of Vibrio parahaemolyticus: a pathogenic mechanism distinct from that of V cholerae. Makino K, et al. Lancet, 2003 Mar 1. PMID 12620739
    3. In vivo expression technology identifies a type VI secretion system locus in Burkholderia pseudomallei that is induced upon invasion of macrophages. Shalom G, et al. Microbiology (Reading), 2007 Aug. PMID 17660433
    4. A virulence locus of Pseudomonas aeruginosa encodes a protein secretion apparatus. Mougous JD, et al. Science, 2006 Jun 9. PMID 16763151, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

    Go to the top of the page Help
    Preferred Names
    type VI secretion system baseplate subunit TssE

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004605.1 Reference assembly

      Range
      1087589..1088053 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_005463817.1 type VI secretion system baseplate subunit TssE [Vibrio parahaemolyticus]

      See identical proteins and their annotated locations for WP_005463817.1

      UniProtKB/TrEMBL
      Q87HD4
      Conserved Domains (1) summary
      cl01403
      Location:4 → 143
      GPW_gp25; Gene 25-like lysozyme
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.