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    AL542_RS00165 type I secretion system permease/ATPase [ Grimontia hollisae ]

    Gene ID: 58894279, updated on 29-Sep-2023

    Summary

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    Gene symbol
    AL542_RS00165
    Gene description
    type I secretion system permease/ATPase
    Locus tag
    AL542_RS00165
    Gene type
    protein coding
    Organism
    Grimontia hollisae (strain: FDAARGOS_111, nat-host: Homo sapiens, culture-collection: FDA:FDAARGOS_111)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae; Grimontia
    Old locus tag
    AL542_00160
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    Genomic context

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    Location:
    chromosome: 2

    2 - NZ_CP014055.2Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene FapA family protein Neighboring gene EAL domain-containing protein Neighboring gene transglutaminase-like cysteine peptidase Neighboring gene OmpA family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP014055.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    type I secretion system permease/ATPase

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP014055.2 Reference assembly

      Range
      35527..37644 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_005504637.1 type I secretion system permease/ATPase [Grimontia hollisae]

      See identical proteins and their annotated locations for WP_005504637.1

      UniProtKB/TrEMBL
      A0A377J834, D0I8X2
      Conserved Domains (4) summary
      cd03245
      Location:468 → 687
      ABCC_bacteriocin_exporters; ATP-binding cassette domain of bacteriocin exporters, subfamily C
      cd02421
      Location:3 → 123
      Peptidase_C39_likeD; A sub-family of peptidase family C39. Peptidase family C39 mostly contains bacteriocin-processing endopeptidases from bacteria. The cysteine peptidases in family C39 cleave the "double-glycine" leader peptides from the precursors of various bacteriocins ...
      TIGR03375
      Location:6 → 700
      type_I_sec_LssB; type I secretion system ATPase, LssB family
      cl00549
      Location:159 → 424
      ABC_membrane; ABC transporter transmembrane region
    Nucleotide Protein
    Heading Accession and Version

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