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    INE72_RS13905 thiamine pyrophosphate-dependent enzyme [ Bacteroides caccae CL03T12C61 ]

    Gene ID: 75113948, updated on 1-Aug-2024

    Summary

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    Gene symbol
    INE72_RS13905
    Gene description
    thiamine pyrophosphate-dependent enzyme
    Locus tag
    INE72_RS13905
    Gene type
    protein coding
    Organism
    Bacteroides caccae CL03T12C61 (strain: CL03T12C61, nat-host: Homo sapiens)
    Lineage
    Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides
    Old locus tag
    INE72_02750
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    Genomic context

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    NZ_CP072258.1Genomic Context describing neighboring genes Neighboring gene putative porin Neighboring gene 2-oxoacid:acceptor oxidoreductase family protein Neighboring gene hypothetical protein Neighboring gene 3-methyl-2-oxobutanoate dehydrogenase subunit VorB

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP072258.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Crystal structure of the thiamin diphosphate-dependent enzyme pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at 2.3 A resolution. Arjunan P, et al. J Mol Biol, 1996 Mar 1. PMID 8604141
    2. Mobile Type VI secretion system loci of the gut Bacteroidales display extensive intra-ecosystem transfer, multi-species spread and geographical clustering. García-Bayona L, et al. PLoS Genet, 2021 Apr. PMID 33901198, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    thiamine pyrophosphate-dependent enzyme

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP072258.1 Reference assembly

      Range
      3410672..3411436 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_005677852.1 MULTISPECIES: thiamine pyrophosphate-dependent enzyme [Bacteroides]

      See identical proteins and their annotated locations for WP_005677852.1

      UniProtKB/TrEMBL
      A0A174PWJ1, A0A1G8FIW1, I9PXR2
      Conserved Domains (1) summary
      cl01629
      Location:27 → 222
      TPP_enzymes; Thiamine pyrophosphate (TPP) enzyme family, TPP-binding module; found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. These enzymes include, among others, the E1 components of the pyruvate, the acetoin and ...
    Nucleotide Protein
    Heading Accession and Version

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