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    PSPTO_RS12305 substrate-binding domain-containing protein [ Pseudomonas syringae pv. tomato str. DC3000 ]

    Gene ID: 1184021, updated on 3-Dec-2024

    Summary

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    Gene symbol
    PSPTO_RS12305
    Gene description
    substrate-binding domain-containing protein
    Locus tag
    PSPTO_RS12305
    Gene type
    protein coding
    Organism
    Pseudomonas syringae pv. tomato str. DC3000 (strain: DC3000, pathovar: tomato, type-material: reference strain of Pseudomonas syringae group genomosp. 3)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
    Old locus tag
    PSPTO2370; PSPTO_2370
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    Genomic context

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    Sequence:
    NC_004578.1 (2621811..2622827)

    NC_004578.1Genomic Context describing neighboring genes Neighboring gene sugar ABC transporter substrate-binding protein Neighboring gene sugar ABC transporter ATP-binding protein Neighboring gene ABC transporter permease Neighboring gene ribokinase Neighboring gene nucleoside hydrolase Neighboring gene D-ribose pyranase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_004578.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Allostery in the LacI/GalR family: variations on a theme. Swint-Kruse L, et al. Curr Opin Microbiol, 2009 Apr. PMID 19269243, Free PMC Article
    2. The complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv. tomato DC3000. Buell CR, et al. Proc Natl Acad Sci U S A, 2003 Sep 2. PMID 12928499, Free PMC Article
    3. Parallel evolution of ligand specificity between LacI/GalR family repressors and periplasmic sugar-binding proteins. Fukami-Kobayashi K, et al. Mol Biol Evol, 2003 Feb. PMID 12598694

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    substrate-binding domain-containing protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004578.1 Reference assembly

      Range
      2621811..2622827
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_005765639.1 MULTISPECIES: substrate-binding domain-containing protein [Pseudomonas syringae group]

      See identical proteins and their annotated locations for WP_005765639.1

      UniProtKB/TrEMBL
      A0A0N0WU93, A0A0P9KFW5, A0A0P9KM04, A0A0Q0CUP6, Q883I7
      Conserved Domains (2) summary
      smart00354
      Location:2 → 71
      HTH_LACI; helix_turn _helix lactose operon repressor
      cd06275
      Location:61 → 328
      PBP1_PurR; ligand-binding domain of purine repressor, PurR, which functions as the master regulatory protein of de novo purine nucleotide biosynthesis in Escherichia coli
    Nucleotide Protein
    Heading Accession and Version

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